Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05779 and RBAM_034970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:17
# Commandline: needle
# -asequence pep-align/BSNT_05779___rocB.1.9828.seq
# -bsequence pep-align/RBAM_034970___rocB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05779___rocB-RBAM_034970___rocB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05779___rocB-RBAM_034970___rocB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05779___rocB
# 2: RBAM_034970___rocB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 566
# Identity: 442/566 (78.1%)
# Similarity: 507/566 (89.6%)
# Gaps: 6/566 ( 1.1%)
# Score: 2428.0
#
#
#=======================================
BSNT_05779___ 1 MQYTKISHMNPAERVEALTASLVSLSSVNGTVGEGTKADFIKEVITSYPY 50
.|.::|.|.|.|::||:|.|||:|:|:|||:|||.|||:||::|.|:||
RBAM_034970__ 1 -MYQQLSKMLPEEKIEAITKSLVALNSINGTLGEGKKADYIKDMIKSFPY 49
BSNT_05779___ 51 FQENPSHVWEQAIPNDPYNRKNIFAFIKGHGESRNTVIYHAHLDTVGIED 100
||||||||||||||.|||.||||||||:|:|||.||||||||||||||||
RBAM_034970__ 50 FQENPSHVWEQAIPEDPYGRKNIFAFIEGNGESLNTVIYHAHLDTVGIED 99
BSNT_05779___ 101 FGPLKDIAFDCEKLAEYFSRYEFDQDVQRDAKSGDWMFGRGSVDMQSGIA 150
||||||||||.::||||||.||||:||||||:||:|||||||||||||||
RBAM_034970__ 100 FGPLKDIAFDSDRLAEYFSNYEFDRDVQRDARSGEWMFGRGSVDMQSGIA 149
BSNT_05779___ 151 VHLANLLHFSENLETLPGNVLFMANPDEESQHSGILASISELNRLKKEKQ 200
|||||||||||..:.|||::||||||||||||||||.|||||.|||:|||
RBAM_034970__ 150 VHLANLLHFSERRDQLPGHILFMANPDEESQHSGILTSISELKRLKQEKQ 199
BSNT_05779___ 201 LHYLAAINTDFITPLYDGDQTRYIYTGAAGKLLPCFYIYGREVHVGDTLA 250
|.||||||.|||||||:||.||||||||||||||||.||||||||||||:
RBAM_034970__ 200 LRYLAAINNDFITPLYEGDTTRYIYTGAAGKLLPCFAIYGREVHVGDTLS 249
BSNT_05779___ 251 GIDPNFISSEITSRLHNNIHLAEKVEGELVLPPSCLYQRDNKESYNVQTA 300
|||||.|:||||.|:|||||:||.:||||||||:|||||||||:||||||
RBAM_034970__ 250 GIDPNLIASEITRRIHNNIHMAENIEGELVLPPTCLYQRDNKEAYNVQTA 299
BSNT_05779___ 301 VSTSLYFNCFIYERTAKEMMDLLIEVTEEACQETEQKLSDYYEEYAKRAN 350
||:.:|||.||||:|||.:||.|..|.:|||:||||||||||:||.:|.:
RBAM_034970__ 300 VSSYVYFNYFIYEKTAKVVMDQLTAVADEACRETEQKLSDYYDEYCERTS 349
BSNT_05779___ 351 LPKKHLSWDIQVYSLEQYLEKLRNRGIDPEQCIEQTFKANEHLELRMRCF 400
||||.:||::||||||.||::||:|||||.|||||.||..||||||||||
RBAM_034970__ 350 LPKKEMSWNVQVYSLEDYLKRLRSRGIDPAQCIEQAFKTYEHLELRMRCF 399
BSNT_05779___ 401 QAIEELQKLDPDQGAKVILFYAPPYLPHNYLKEDSARDQLLQHVIKEAAD 450
:|:||||||||:||||||:||||||||||||||:|:||:||||||:||.|
RBAM_034970__ 400 KAVEELQKLDPEQGAKVIIFYAPPYLPHNYLKEESSRDRLLQHVIQEAVD 449
BSNT_05779___ 451 KTAESTGETFVFKKFFPYLADGSFLSLHETDGEIDSFIRNFPGWNMIGTI 500
|||.|||||||||||||||||||||||||||.|:.:|..|||||::||||
RBAM_034970__ 450 KTAASTGETFVFKKFFPYLADGSFLSLHETDEEVSAFTDNFPGWDVIGTI 499
BSNT_05779___ 501 PFKDIRKLNIPSINMGVYGKDGHKWTERVYKPYTFHVLPLLIQQTTVHLL 550
|||:||:|||||:|:||||||||||||||||||||||||.||||||:|||
RBAM_034970__ 500 PFKEIRELNIPSVNIGVYGKDGHKWTERVYKPYTFHVLPELIQQTTMHLL 549
BSNT_05779___ 551 QSYRMTITAKEPKGEG 566
.|||:.|....
RBAM_034970__ 550 HSYRLDIRTNG----- 560
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