Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05654 and RBAM_034190
See
DNA alignment /
Visit
BSNT_05654 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence pep-align/BSNT_05654___racA.1.9828.seq
# -bsequence pep-align/RBAM_034190___racA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05654___racA-RBAM_034190___racA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05654___racA-RBAM_034190___racA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05654___racA
# 2: RBAM_034190___racA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 121/187 (64.7%)
# Similarity: 150/187 (80.2%)
# Gaps: 3/187 ( 1.6%)
# Score: 604.5
#
#
#=======================================
BSNT_05654___ 1 MNTNMVASELGVSAKTVQRWVKQLNLPAERNELGHYSFTAEDVKVLKSVQ 50
|||||.|.|||||||||||||||||||||||||||||||.||:.|||||:
RBAM_034190__ 1 MNTNMAAKELGVSAKTVQRWVKQLNLPAERNELGHYSFTPEDLDVLKSVK 50
BSNT_05654___ 51 KQISEGTAIQDIHLPKSAKKRTGFLVQ--KTSSDTERRIEQLEQKLDTLL 98
:|||||||:.|:.:|:..||||||::| |.:...|:|:.:||:|||.|.
RBAM_034190__ 51 RQISEGTALLDVQVPRQPKKRTGFILQRPKINGGAEQRLAELERKLDILT 100
BSNT_05654___ 99 QQRQDESELMARMSELERQLKQKADEGVSYQLLQHRREIDDILADLQSMT 148
:::|.||.|::|:.|||||||||||||||||||||||||||:..:||::.
RBAM_034190__ 101 KEKQGESHLLSRIEELERQLKQKADEGVSYQLLQHRREIDDLNTELQTLA 150
BSNT_05654___ 149 SQMKEFT-AQPIPETAAASEKTKTRKKPLLSLFKFQT 184
|:::|.. ..|:.||||:||..|.|||...|.||||.
RBAM_034190__ 151 SRIQELAQTAPLSETAASSEHKKPRKKTRFSPFKFQF 187
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.