Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05507 and RBAM_033280

See DNA alignment / Visit BSNT_05507 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05507___ywrC.1.9828.seq
#    -bsequence pep-align/RBAM_033280___ywrC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05507___ywrC-RBAM_033280___ywrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05507___ywrC-RBAM_033280___ywrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05507___ywrC
# 2: RBAM_033280___ywrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     140/158 (88.6%)
# Similarity:   148/158 (93.7%)
# Gaps:           0/158 ( 0.0%)
# Score: 715.0
# 
#
#=======================================

BSNT_05507___      1 MSHEYQIPNLVLDETDKQILTILHEEGRISYTDLGKRVDLSRVAVQARIN     50
                     |.|||.||||||||||||||:||||||||||||:||||:|||||||.||.
RBAM_033280__      1 MEHEYSIPNLVLDETDKQILSILHEEGRISYTDVGKRVNLSRVAVQHRIQ     50

BSNT_05507___     51 QLIEAGVIEKFTAVINPAKIGIHVSVFFNVEVEPQFLEEVALKLEEEPAV    100
                     .|::|||||||||||||||||.|||||||||||||:|||.|||||:||||
RBAM_033280__     51 HLLDAGVIEKFTAVINPAKIGRHVSVFFNVEVEPQYLEETALKLEKEPAV    100

BSNT_05507___    101 TSLYHMTGPSKLHMHGIFANDQEMEEFLTKRLYPLRGVVSVDCQMLIKRY    150
                     |||||||||||||||||||||||||||||||||..:||||||||||||||
RBAM_033280__    101 TSLYHMTGPSKLHMHGIFANDQEMEEFLTKRLYTQKGVVSVDCQMLIKRY    150

BSNT_05507___    151 KSRMGMKL    158
                     |||.||||
RBAM_033280__    151 KSRTGMKL    158


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