Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05507 and RBAM_033280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence dna-align/BSNT_05507___ywrC.1.9828.seq
# -bsequence dna-align/RBAM_033280___ywrC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05507___ywrC-RBAM_033280___ywrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05507___ywrC-RBAM_033280___ywrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05507___ywrC
# 2: RBAM_033280___ywrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 485
# Identity: 374/485 (77.1%)
# Similarity: 374/485 (77.1%)
# Gaps: 16/485 ( 3.3%)
# Score: 1415.5
#
#
#=======================================
BSNT_05507___ 1 TTGAGTCATGAATATCA-AATCCCCAACCTTGTACTTGATGAGACTGATA 49
|||...|||||||| || .||.||.||.|||||.||||||||.||.||||
RBAM_033280__ 1 TTGGAACATGAATA-CAGCATTCCGAATCTTGTCCTTGATGAAACGGATA 49
BSNT_05507___ 50 AACAAATTCTCACGATTTTGCATGAAGAAGGCAGAATTTCTTATACGGAT 99
||||.|||||..||||||||||.||.|||||.||.|||||.|||||.||.
RBAM_033280__ 50 AACAGATTCTTTCGATTTTGCACGAGGAAGGGAGGATTTCCTATACAGAC 99
BSNT_05507___ 100 CTTGGCAAAAGAGTCGATT----TGTCACGGGTCGCCGTGCAGGCCCGTA 145
.|.|| ||||.| |.|| ||||.||.||.||.||.|||..|||.|
RBAM_033280__ 100 GTAGG--AAAGCG--GGTTAACCTGTCGCGAGTGGCGGTTCAGCACCGCA 145
BSNT_05507___ 146 TCAACCAATTAATTGAAGCCGGTGTTATTGAAAAATTCACCGCTGTCATC 195
|..|.||.|||.|.||.||||||||.||||||||||||||||||||||||
RBAM_033280__ 146 TTCAGCATTTACTCGATGCCGGTGTGATTGAAAAATTCACCGCTGTCATC 195
BSNT_05507___ 196 AATCCCGCTAAAATCGGCATTCATGTTTCCGTGTTTTTCAATGTCGAGGT 245
||.||.||.|||||||||...|||||.|||||||||||.|||||.|||||
RBAM_033280__ 196 AACCCGGCGAAAATCGGCCGCCATGTGTCCGTGTTTTTTAATGTGGAGGT 245
BSNT_05507___ 246 AGAACCGCAATTTTTAGAAGAGGTCGCTCTTAAGCTTGAGGAAGAGCCTG 295
.||.|||||.|.|||.||.||...|||..|.||||||||..|.|||||.|
RBAM_033280__ 246 GGAGCCGCAGTATTTGGAGGAAACCGCATTAAAGCTTGAAAAGGAGCCGG 295
BSNT_05507___ 296 CGGTCACCAGCCTTTATCACATGACAGGCCCGAGCAAGCTGCATATGCAT 345
|.||.||.|||||||||||.|||||.||.||||||||||||||||||||.
RBAM_033280__ 296 CCGTGACAAGCCTTTATCATATGACCGGACCGAGCAAGCTGCATATGCAC 345
BSNT_05507___ 346 GGGATCTTTGCCAACGATCAAGAAATGGAAGAATTTTTAACAAAACGGCT 395
||.||.||.||.||.|||||.||.||||||||.|||||.|||||||||||
RBAM_033280__ 346 GGTATTTTCGCAAATGATCAGGAGATGGAAGAGTTTTTGACAAAACGGCT 395
BSNT_05507___ 396 GTATCCATTGC---GAGGCGTCGTCAGTGTTGATTGCCAGATGCTGATCA 442
.|||.| || .||||||||||||.||.||.|||||.||||||||.|
RBAM_033280__ 396 CTATAC---GCAAAAAGGCGTCGTCAGCGTCGACTGCCAAATGCTGATTA 442
BSNT_05507___ 443 AACGATACAAAAGCCGTATGGGAATGAAGCTGTAA 477
||||.||.||||||.|.|.|||.||||||||||||
RBAM_033280__ 443 AACGGTATAAAAGCAGAACGGGCATGAAGCTGTAA 477
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