Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05428 and RBAM_032780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence pep-align/BSNT_05428___lytB.1.9828.seq
# -bsequence pep-align/RBAM_032780___lytB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05428___lytB-RBAM_032780___lytB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05428___lytB-RBAM_032780___lytB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05428___lytB
# 2: RBAM_032780___lytB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 719
# Identity: 393/719 (54.7%)
# Similarity: 508/719 (70.7%)
# Gaps: 18/719 ( 2.5%)
# Score: 1991.0
#
#
#=======================================
BSNT_05428___ 1 MKKMKLLVLSSVTAAALMFTQSAQAADKTISVKLSNYLGNKSSVDIDITG 50
|||....|..||..:..:..:|..|:...|||||:||:||||:::|:.:|
RBAM_032780__ 1 MKKTIWAVCFSVIFSLALLPESTFASSSDISVKLTNYIGNKSTLNIEPSG 50
BSNT_05428___ 51 LYEIPGSGISATERYGGATRFDVANNVASAGWTNPSTVVIVNRDA-FADA 99
.|::.||.:|:..|.|||:::|.||...|..|.|||.||:||.|| |||.
RBAM_032780__ 51 TYKLTGSDVSSVARLGGASKYDTANAATSKYWKNPSNVVVVNTDAYFADT 100
BSNT_05428___ 100 LSATPLAKKYDAPILLTDAGTLTAKTETQIAKMKPDNILIIGGTTSVSKN 149
||..|||.|..||:|||:|..|::.||.||.|..||||||||||.|:|..
RBAM_032780__ 101 LSVIPLANKLKAPVLLTEAKKLSSSTEAQIKKFSPDNILIIGGTNSISSA 150
BSNT_05428___ 150 VENTLKKYGAIVRIGGANRYDVSKNIASRMGSYSQAIVATGLVFSDALSI 199
.|.||||||...||.|.||||:|||||:.||||.||:|.||.|::|||:|
RBAM_032780__ 151 AEKTLKKYGRTKRISGKNRYDLSKNIAAEMGSYDQAVVVTGDVYTDALAI 200
BSNT_05428___ 200 APYAAMNGYPILLSGNNTIRSDYNIPSKVTIVGGPLSVSTSVENTLKKKA 249
|||||.|||||||:..:::.| ||:|.||.|:||..|||..|||.:||||
RBAM_032780__ 201 APYAAQNGYPILLTKKDSLPS-YNLPKKVIIMGGTSSVSKDVENQIKKKA 249
BSNT_05428___ 250 AVT-RIGGANRYEVSANIVNALNMNASKVFMSNGMTFADALAGSVLAAKQ 298
:|| ||.|:|||::|||.|.:|.|:|||...:||...||.:.||.:||..
RBAM_032780__ 250 SVTKRITGSNRYQISANAVTSLGMDASKTVAANGTKLADIVVGSNIAAAN 299
BSNT_05428___ 299 KHPLLLVQSGSLPPPVADVVAKKGTQSFALLGGTASITDSLKNSLAD--- 345
..||:.::....|...|.:...|||.|:.|:|...||.||:|.:.|.
RBAM_032780__ 300 HMPLVYIKKSETPADEASLFKTKGTYSYTLIGSANSIADSVKAAYAKEFY 349
BSNT_05428___ 346 MITGNGYSVNLSGGKLVLNKNNKAVKTFETSFTASPKKYSTSNSISINGR 395
::.|..|.:..|||||.: ..:.:.:|||.|.|:||||:|:|||:|:
RBAM_032780__ 350 LVNGKTYRIETSGGKLGV----AGINSGKTSFKAVPEKYSTANTISIDGK 395
BSNT_05428___ 396 PYLGNMKFTIESSKYIRPINENIPFEDYLKGVVPHEMPASWQTEALKAQA 445
||||||.||.||.||:||:|||||||||||||:|:|||.||.||||||||
RBAM_032780__ 396 PYLGNMSFTAESGKYVRPVNENIPFEDYLKGVLPNEMPGSWPTEALKAQA 445
BSNT_05428___ 446 VAARTYSVGSAGKVVADTQSFQVYGGYDWNSKTSSVVNSTKGQVLKYNGN 495
|||||||:|..|:.||||.:|||||||.|....::.||.|||:||.|:|.
RBAM_032780__ 446 VAARTYSIGKMGQTVADTTAFQVYGGYSWYPNATAAVNGTKGKVLTYSGR 495
BSNT_05428___ 496 LISAVYSSSNGGYTEASAEVWGGNVPYLIAKADTYDPKTSWSISLNKTQI 545
||.|.||||||||.||..||||..||||:||.||.||:.|||::|.|.|:
RBAM_032780__ 496 LIDATYSSSNGGYMEAGDEVWGSKVPYLVAKKDTKDPEISWSLTLQKQQL 545
BSNT_05428___ 546 NTSGLNLSSPSTWWNSTNETNSAYLSGLKSWFMTNKYPSAESIKITKISS 595
.:||::.:|::||:.|||.|:|.|:|:|:|.|.||..:|.||||..||.
RBAM_032780__ 546 -PAGLDMKNPASWWSKTNEANAAQLNGIKNWLMKNKETNASSIKIASISD 594
BSNT_05428___ 596 LSLSSAKTAGQRPKTAEVKFSYFVKEKSNGYVLSNGKLSEKTATISVTTT 645
||| :.||.|||.:.|.||.:|.|.:||.|||:: |||::.|..:
RBAM_032780__ 595 LSL-TGKTKGQRAEDAAVKVTYHVNDKSKGYVMN------KTASVEVKAS 637
BSNT_05428___ 646 QLRSMLGGMNMKSTYASLSNNTNAFILSGKGFGHGIGMSQYGANARAAAG 695
:||:|:|..:.||||||.|.|::...:||||:|||:|||||||..||.||
RBAM_032780__ 638 ELRTMIGASSFKSTYASASGNSSQITISGKGYGHGVGMSQYGAKERAEAG 687
BSNT_05428___ 696 HDYKKILSFYYPNTTLSSY 714
..|..||:||||||.|::|
RBAM_032780__ 688 EPYTSILAFYYPNTALTNY 706
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