Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05422 and RBAM_032760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence pep-align/BSNT_05422___tuaA.1.9828.seq
# -bsequence pep-align/RBAM_032760___tuaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05422___tuaA-RBAM_032760___tuaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05422___tuaA-RBAM_032760___tuaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05422___tuaA
# 2: RBAM_032760___tuaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 140/213 (65.7%)
# Similarity: 169/213 (79.3%)
# Gaps: 2/213 ( 0.9%)
# Score: 723.0
#
#
#=======================================
BSNT_05422___ 1 --MYNEYSSQQTYSCALSKKAVRYLYMKRVMDIVLSLIGLALTLPFILLF 48
:.|.|:.:|..|.|::::..|||..||.||||.:|.||...||.:.||
RBAM_032760__ 1 MNVNNNYAVRQGTSAAVTERTARYLAFKRFMDIVFALAGLLAALPVMGLF 50
BSNT_05422___ 49 CILICIETPGSPLYRQERVGKDGKHFKVIKLRSMRIDAEKSGAKWAQKDD 98
.|||.:|:||...|:|||||||||.|.:.|||||:||||||||.||.|.|
RBAM_032760__ 51 SILIRLESPGPAFYKQERVGKDGKPFYLYKLRSMKIDAEKSGAVWALKKD 100
BSNT_05422___ 99 PRITAVGSFIRRTRIDELPQLINVLAGDMSLVGPRPERPMFTAQFHNEIP 148
||:|.||:|||||||||||||:|||.|:|||:|||||||:||.||..|||
RBAM_032760__ 101 PRVTKVGAFIRRTRIDELPQLVNVLRGEMSLIGPRPERPVFTEQFQAEIP 150
BSNT_05422___ 149 GFKNRLIVKPGLTGLAQVNGGYDISPREKLVHDLYYIRNLTFLLDLKVIL 198
||..||.|||||:|.||||||||::|||||:.||||||||||.|:||::|
RBAM_032760__ 151 GFTERLAVKPGLSGWAQVNGGYDMTPREKLMFDLYYIRNLTFSLELKIML 200
BSNT_05422___ 199 KTIKVVLTGEGAR 211
||.||:.||:|||
RBAM_032760__ 201 KTCKVIWTGDGAR 213
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