Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05422 and RBAM_032760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence dna-align/BSNT_05422___tuaA.1.9828.seq
# -bsequence dna-align/RBAM_032760___tuaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05422___tuaA-RBAM_032760___tuaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05422___tuaA-RBAM_032760___tuaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05422___tuaA
# 2: RBAM_032760___tuaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 659
# Identity: 430/659 (65.3%)
# Similarity: 430/659 (65.3%)
# Gaps: 40/659 ( 6.1%)
# Score: 1205.0
#
#
#=======================================
BSNT_05422___ 1 ----ATGT--ACAATGAATATTCA---AGCCAGCAAACATATTCCTGTGC 41
|||| |.|||.|.|||.|| .|.|||...|| ||||..|||
RBAM_032760__ 1 ATGAATGTAAATAATAACTATGCAGTGCGGCAGGGGAC---TTCCGCTGC 47
BSNT_05422___ 42 TCTATCTAAAAAAGCAGTACGATATTTATATATGAAACGGGTAATGGACA 91
..|..|..|||.|.|.|..||.|||||...|.|.||.||..|.|||||||
RBAM_032760__ 48 CGTTACGGAAAGAACGGCCCGTTATTTGGCTTTTAAGCGATTCATGGACA 97
BSNT_05422___ 92 TCGTCCTTTC-CTTGATTGGGCTCGCTCTT----ACACTACCGTTTATTC 136
|.||..||.| |||| .||| |||||| .||||.|||.|.||..
RBAM_032760__ 98 TTGTGTTTGCGCTTG--CGGG---GCTCTTGGCGGCACTCCCGGTGATGG 142
BSNT_05422___ 137 TGCTGTTTTGTATATTAATCTGTATCGAAACACCAGGTTCCC--CTTTAT 184
..|||||.|..|||.|.||..||.|.||..|.||.|| ||| ||||.|
RBAM_032760__ 143 GCCTGTTCTCCATACTGATTCGTTTGGAGTCGCCCGG--CCCGGCTTTTT 190
BSNT_05422___ 185 ACCGCCAGGAACGCGTCGGAAAAGACGGGAAGCATTTTAAGGTG-ATCAA 233
|....|||||.||.||.||.|||||||||||||..|||.|..|| || ||
RBAM_032760__ 191 ATAAGCAGGAGCGGGTAGGCAAAGACGGGAAGCCGTTTTATTTGTAT-AA 239
BSNT_05422___ 234 ATTGCGTTCTATGAGAATTGACGCAGAAAAATCCGGTGCAAAATGGGCGC 283
..|.||.|||||||.|||.||.||.||||||||.||.||....|||||||
RBAM_032760__ 240 GCTCCGCTCTATGAAAATAGATGCTGAAAAATCGGGGGCGGTCTGGGCGC 289
BSNT_05422___ 284 AGAAGGATGATCCGCGCATTACTGCAGTCGGGTCTTTTATAAGAAGAACA 333
.|||..|.|||||.|||.|.||....|||||..|||||||.|||||.||.
RBAM_032760__ 290 TGAAAAAGGATCCCCGCGTGACAAAGGTCGGCGCTTTTATCAGAAGGACC 339
BSNT_05422___ 334 AGAATCGATGAACTTCCGCAGTTGATCAATGTGCT--GGCTGGTGACATG 381
.|.||.|||||.||.||||||.||.|.|||||||| || ||.||.|||
RBAM_032760__ 340 CGTATTGATGAGCTGCCGCAGCTGGTAAATGTGCTTCGG--GGAGAAATG 387
BSNT_05422___ 382 AGCCTTGTGGGGCCAAGGCCTGAAAGACCGATGTTTACCGCTCAGTTTCA 431
|||||..|.||.||..|.||.||..|.||..|||||||.|..||||||||
RBAM_032760__ 388 AGCCTGATCGGCCCGCGTCCCGAGCGTCCCGTGTTTACGGAACAGTTTCA 437
BSNT_05422___ 432 CAACGAAATTCCGGGATTTAAAAATCGCTTAATTGTTAAACCGGGGTTAA 481
...|||.||||||||.||||...|.||..|....|||||.|||||.||||
RBAM_032760__ 438 GGCCGAGATTCCGGGGTTTACGGAGCGGCTGGCCGTTAAGCCGGGATTAA 487
BSNT_05422___ 482 -CGGGACT-TGCTCAGGTAAACGGAGGCTATGATATCAGTCCGAGAGAAA 529
||| || .||.|||||.|||||.||.|||||.||.|..|||||.||||
RBAM_032760__ 488 GCGG--CTGGGCGCAGGTCAACGGGGGATATGACATGACACCGAGGGAAA 535
BSNT_05422___ 530 AATTGGTGCACGATCTGTATTACATTCGGAACTTAACGTTTCTTC--TCG 577
||.||.||...||..|.|||||.||.||.|||.|.||.|| ||| |.|
RBAM_032760__ 536 AACTGATGTTTGACTTATATTATATCCGCAACCTGACCTT--TTCATTGG 583
BSNT_05422___ 578 ATTTAAAGGTTATACTAAAAACGATTAAAGTTGTATTGACTGGCGAAGGA 627
|..|.|||.||||.||.||||||...|||||..|.|.|||.||.||.||.
RBAM_032760__ 584 AACTGAAGATTATGCTCAAAACGTGCAAAGTGATCTGGACCGGTGACGGG 633
BSNT_05422___ 628 GCCAGATAA 636
||..|||||
RBAM_032760__ 634 GCGCGATAA 642
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