Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04172 and RBAM_025660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence pep-align/BSNT_04172___yshC.1.9828.seq
# -bsequence pep-align/RBAM_025660___yshC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04172___yshC-RBAM_025660___yshC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04172___yshC-RBAM_025660___yshC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04172___yshC
# 2: RBAM_025660___yshC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity: 496/570 (87.0%)
# Similarity: 531/570 (93.2%)
# Gaps: 0/570 ( 0.0%)
# Score: 2561.0
#
#
#=======================================
BSNT_04172___ 1 MHKKDIIRLLETIAVYMELKGDNPFKVSAFRKAAAALEQDDRSLSEMDDM 50
||||||||||||||||||||||||||:|||||||||||||||||||:|||
RBAM_025660__ 1 MHKKDIIRLLETIAVYMELKGDNPFKISAFRKAAAALEQDDRSLSEIDDM 50
BSNT_04172___ 51 MSLSGIGKGTYSVIKEYIDEGKSSTLESLQKEVPEGLVPLLKLPGLGGKK 100
|||||||||||.||:||:.||.|.||..||||||||||||||||||||||
RBAM_025660__ 51 MSLSGIGKGTYGVIREYMQEGVSGTLLQLQKEVPEGLVPLLKLPGLGGKK 100
BSNT_04172___ 101 IAKLYKELGVHDAESLKEACEQQKVQGLAGFGKKSEEKILQALGEAGKQP 150
|||||:||||||||||||||||||||||||||||:|||||||||||||||
RBAM_025660__ 101 IAKLYQELGVHDAESLKEACEQQKVQGLAGFGKKTEEKILQALGEAGKQP 150
BSNT_04172___ 151 ERFPIGYALRIAREIEEHLSQFTHIIKFSRAGSLRRARETVKDLDYIIAT 200
|||||||||.||..|||||::.|.|.|:||||||||||||||||||||||
RBAM_025660__ 151 ERFPIGYALSIASVIEEHLARLTDIQKYSRAGSLRRARETVKDLDYIIAT 200
BSNT_04172___ 201 DHPAEVREQLLELPNIKSVIASGDTKVSVILSFEYETSVDFRLVTEEQFP 250
|||..||||||.|||:|.||||||||||:||:||||.||||||||||||.
RBAM_025660__ 201 DHPEAVREQLLSLPNVKDVIASGDTKVSLILTFEYEMSVDFRLVTEEQFA 250
BSNT_04172___ 251 TTLHHFTGSKDHNIKMRQIAKERGERISEYGVETVETGEIKTFPSEREFY 300
||||||||||||||||||:|||||||||||||||:|||::||||||..||
RBAM_025660__ 251 TTLHHFTGSKDHNIKMRQLAKERGERISEYGVETIETGDVKTFPSEEAFY 300
BSNT_04172___ 301 AHFGLPLIPPEIRESGQEVETYSDSIELIEPGQIKGDLHMHSTWSDGAFS 350
||||||.||||:|||||||:||.:..:|:|...|||||||||.|||||||
RBAM_025660__ 301 AHFGLPFIPPELRESGQEVDTYREETDLVEHKAIKGDLHMHSAWSDGAFS 350
BSNT_04172___ 351 IREMAEACIKKGYQYMAITDHSQYLKVANGLTAERLKQQAKEIDALNAEF 400
||||||||:.|||||||||||||||||||||||||||:||:|||||||||
RBAM_025660__ 351 IREMAEACMAKGYQYMAITDHSQYLKVANGLTAERLKKQAEEIDALNAEF 400
BSNT_04172___ 401 ENFRILKGVEMDILPDGTLDYDDDMLAEMDIVIASIHSSFNQPEHVIMKR 450
|||.|.|||||||||||:|||||.:|:|||:|||||||||:|||||||||
RBAM_025660__ 401 ENFHIFKGVEMDILPDGSLDYDDSVLSEMDLVIASIHSSFSQPEHVIMKR 450
BSNT_04172___ 451 LETALTNKHVDIIAHPTGRLIGRRAGYEIDIDQLIELARKTNTALELNAN 500
||.|||||||||||||||||||||||||:|||.|||||.|||||||||||
RBAM_025660__ 451 LEQALTNKHVDIIAHPTGRLIGRRAGYEVDIDMLIELAAKTNTALELNAN 500
BSNT_04172___ 501 PARLDLRTEHLMKANEQGVTLVINTDAHNIEMLDDMKTGVTAARKGWTET 550
|||||||||||:||||:|||||||||||||||||||||||||||||||||
RBAM_025660__ 501 PARLDLRTEHLIKANEKGVTLVINTDAHNIEMLDDMKTGVTAARKGWTET 550
BSNT_04172___ 551 KNVLNARSLKDVEVFLKRND 570
|:|||||.|.:|:.||.|||
RBAM_025660__ 551 KHVLNARPLHEVKAFLTRND 570
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