Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04003 and RBAM_024700

See DNA alignment / Visit BSNT_04003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_04003___yrvI.1.9828.seq
#    -bsequence pep-align/RBAM_024700___yrvI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04003___yrvI-RBAM_024700___yrvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04003___yrvI-RBAM_024700___yrvI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04003___yrvI
# 2: RBAM_024700___yrvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     121/147 (82.3%)
# Similarity:   136/147 (92.5%)
# Gaps:           1/147 ( 0.7%)
# Score: 634.0
# 
#
#=======================================

BSNT_04003___      1 MRLVVQRVTEASVTVDEEVVGQIGQGLMVLVGITHDDTEDDAAYLADKVV     50
                     |:|||||||||||||:..|.|:||.|:|.||||||:|||:||||||||:|
RBAM_024700__      1 MKLVVQRVTEASVTVEGAVAGRIGPGIMALVGITHEDTEEDAAYLADKIV     50

BSNT_04003___     51 NLRIFDDSEGKMNLSLVDIGGEILSVSQFTLYGDTKKGRRPNYMNAAKPD    100
                     |||||||..|||||||:|.||||||||||||||:||||||||:|||||||
RBAM_024700__     51 NLRIFDDESGKMNLSLLDTGGEILSVSQFTLYGETKKGRRPNFMNAAKPD    100

BSNT_04003___    101 KALGLYEKWNDLLREKGIKVETGTFGAMMDVQLTNSGPVTLIMDSK-    146
                     :|:.||||||:||||||:|||||.||||||||||||||:||||||| 
RBAM_024700__    101 QAVLLYEKWNELLREKGVKVETGIFGAMMDVQLTNSGPITLIMDSKQ    147


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