Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03726 and RBAM_023250

See DNA alignment / Visit BSNT_03726 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03726___pstBB.1.9828.seq
#    -bsequence pep-align/RBAM_023250___pstBB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03726___pstBB-RBAM_023250___pstBB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03726___pstBB-RBAM_023250___pstBB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03726___pstBB
# 2: RBAM_023250___pstBB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     196/260 (75.4%)
# Similarity:   221/260 (85.0%)
# Gaps:           0/260 ( 0.0%)
# Score: 1035.0
# 
#
#=======================================

BSNT_03726___      1 MSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGC     50
                     ||:..|||..|.::.::|||:|||.|.|||:|.:...|.:||||||||||
RBAM_023250__      1 MSLVKEAVHTQNLFDIHGMNVWYGAHQALKDITIGFEERKVTAIIGPSGC     50

BSNT_03726___     51 GKSTFIKTLNLMIQMTPNVKLAGELNYNGSNILKDKVDIVDLRKNIGMVF    100
                     ||||||||||||:||.||||:.|::.|||.|:||:|.|..:|||.|||||
RBAM_023250__     51 GKSTFIKTLNLMLQMAPNVKVTGDMIYNGRNLLKEKTDAAELRKQIGMVF    100

BSNT_03726___    101 QKGNPFPQSIFDNVAYGPRVHGTKNKKKLQEIVEKSLKDVALWDEVKDRL    150
                     |||||||||||:||.||||:||.||||||.||.|:|||..||||||||||
RBAM_023250__    101 QKGNPFPQSIFENVVYGPRIHGEKNKKKLLEIAEESLKAAALWDEVKDRL    150

BSNT_03726___    151 HTSALSLSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIEELIL    200
                     |..||||||||||||||||||||.||:||||||||||||:||||||||||
RBAM_023250__    151 HQQALSLSGGQQQRLCIARALATKPDVLLMDEPTSALDPVSTRKIEELIL    200

BSNT_03726___    201 ELKNKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNPKDQR    250
                     .||.|||||||||||||||||||||||||||||||..:|.|:||.|..|:
RBAM_023250__    201 TLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEWGDTGKIFSQPDHQK    250

BSNT_03726___    251 TLDYISGKFG    260
                     |.|||:||||
RBAM_023250__    251 THDYITGKFG    260


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