Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03726 and RBAM_023250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03726___pstBB.1.9828.seq
# -bsequence dna-align/RBAM_023250___pstBB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03726___pstBB-RBAM_023250___pstBB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03726___pstBB-RBAM_023250___pstBB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03726___pstBB
# 2: RBAM_023250___pstBB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity: 568/813 (69.9%)
# Similarity: 568/813 (69.9%)
# Gaps: 60/813 ( 7.4%)
# Score: 1918.0
#
#
#=======================================
BSNT_03726___ 1 ATGAGTATTGCTACCGAAGCCGTAATGAAACAGGAAGTCTATCA-AGTCA 49
.||||..|||..|..|||||.||....|.||||.|..|.|.|.| |.||
RBAM_023250__ 1 GTGAGCCTTGTGAAGGAAGCGGTGCACACACAGAATTTATTTGATATTC- 49
BSNT_03726___ 50 ATGGAATGAACTTATGGTATGGACAGCATCATGCTTTAAAAAATATCA-- 97
|.||.||||||.|||||||.|||...||.||.|||||||||.|.||.|
RBAM_023250__ 50 ACGGCATGAACGTATGGTACGGAGCCCACCAGGCTTTAAAAGACATTACG 99
BSNT_03726___ 98 -----ATTTGAGCATTTATGAAAATG----AGGTTACGGCGATTATCGGT 138
.||||||.| | ||||.||.|||||.||||||
RBAM_023250__ 100 ATCGGTTTTGAGGA-----------GCGGAAGGTAACTGCGATCATCGGT 138
BSNT_03726___ 139 CCATCCGGATGCGGGAAATCGACCTTTATCAAGACATTGAATTTAATGAT 188
||.|||||.|||||||||||.||.|||||.||.|||||.||.||||||.|
RBAM_023250__ 139 CCGTCCGGCTGCGGGAAATCCACTTTTATTAAAACATTAAACTTAATGCT 188
BSNT_03726___ 189 TCAAATGACGCCAAATGT-AAAGCTTG-CAGGTGAGCTGAACTATAATGG 236
.||||||.|.||.||||| |||| || ||||.||..|||.||||||.||
RBAM_023250__ 189 GCAAATGGCCCCGAATGTCAAAG--TGACAGGCGACATGATCTATAACGG 236
BSNT_03726___ 237 CAGCAACATTTTAAAGGATAAAGTGGACATCGTGGAT---------TTAC 277
..||||..|..|.||.||.|| ||| |||| |||.
RBAM_023250__ 237 GCGCAATCTGCTGAAAGAAAA----GAC-----GGATGCGGCAGAATTAA 277
BSNT_03726___ 278 GGAAAAATATCGGCATGGTATTCCAAAAAGGGAACCCGTTTCCGCAATCT 327
|.|||.|.|||||.|||||.||.||||||||.||.||||||||.||.||.
RBAM_023250__ 278 GAAAACAGATCGGTATGGTGTTTCAAAAAGGCAATCCGTTTCCCCAGTCA 327
BSNT_03726___ 328 ATTTTTGATAATGTGGCTTACGGACCGAGAGTCCACGGCACCAAAAATAA 377
||.|||||.|||||.|..|||||.||||||.|.||||||...||||||||
RBAM_023250__ 328 ATATTTGAGAATGTCGTGTACGGTCCGAGAATTCACGGCGAAAAAAATAA 377
BSNT_03726___ 378 GAAGAAGCTTCAGGAAATTGTGGAAAAGTCATTAAAAGACGTGGCGTTAT 427
.|||||.||.|..|||||.|..||..|.||.|||||.|..|..|||.|.|
RBAM_023250__ 378 AAAGAAACTGCTTGAAATCGCCGAGGAATCTTTAAAGGCAGCTGCGCTCT 427
BSNT_03726___ 428 GGGATGAGGTGAAGGATCGATTGCATACGTCC-----GCTCTTTCGCTGT 472
|||||||.|||||.|||||..|.|| || ||.|||||.||||
RBAM_023250__ 428 GGGATGAAGTGAAAGATCGCCTTCA-----CCAGCAGGCGCTTTCACTGT 472
BSNT_03726___ 473 CAGGGGGCCAGCAGCAGCGTCTTTGCATCGCCAGAGCACTTGCGACCAAT 522
||||.||.|||||||||||.||.||||||||.||.||.||.||.||.||.
RBAM_023250__ 473 CAGGCGGTCAGCAGCAGCGGCTGTGCATCGCAAGGGCGCTCGCCACAAAA 522
BSNT_03726___ 523 CCTGATATTTTGCTGATGGATGAACCGACATCTGCACTAGATCCAATCTC 572
||.||..|..|.|||||||||||||||||.|||||.||.|||||..|.||
RBAM_023250__ 523 CCGGACGTCCTTCTGATGGATGAACCGACGTCTGCTCTTGATCCCGTGTC 572
BSNT_03726___ 573 AACGAGAAAAATTGAAGAACTCATTCTAGAGC--TAAAAAATAAATATAC 620
.|||.|.|||||.|||||.||.||| |.|| | |.|||.|.||.|||||
RBAM_023250__ 573 CACGCGGAAAATAGAAGAGCTGATT-TTGA-CATTGAAAGAAAAGTATAC 620
BSNT_03726___ 621 AATTGTCATTGTCACGCATAACATGCAGCAGGCAGCAAGGGTTTCTGATC 670
|||.||||||||.|||||.|||||||||||||||||.|||||.|||||||
RBAM_023250__ 621 AATCGTCATTGTGACGCACAACATGCAGCAGGCAGCGAGGGTCTCTGATC 670
BSNT_03726___ 671 AAACCGCCTTTTTCTACATGGGCGAGCTTGTTGAATGCGACAATACGAAT 720
|||||||.||||||||.||||||||.||.||.||.||.|...||||....
RBAM_023250__ 671 AAACCGCGTTTTTCTATATGGGCGAACTGGTAGAGTGGGGGGATACAGGC 720
BSNT_03726___ 721 AAAATGTTCTCTAACCCGAAGGACCAAAGAACGCTCGATTACATTTCAGG 770
|||||.||.|||.|.|||.|..|.||||.|||.|..|||||.||..|.||
RBAM_023250__ 721 AAAATATTTTCTCAGCCGGATCATCAAAAAACACATGATTATATCACCGG 770
BSNT_03726___ 771 AAAGTTTGGATGA 783
|||.||.||||.|
RBAM_023250__ 771 AAAATTCGGATAA 783
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