Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02717 and RBAM_016580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence pep-align/BSNT_02717___spoVFB.1.9828.seq
# -bsequence pep-align/RBAM_016580___spoVFB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02717___spoVFB-RBAM_016580___spoVFB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02717___spoVFB-RBAM_016580___spoVFB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02717___spoVFB
# 2: RBAM_016580___spoVFB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 163/200 (81.5%)
# Similarity: 182/200 (91.0%)
# Gaps: 4/200 ( 2.0%)
# Score: 858.0
#
#
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BSNT_02717___ 1 MSSLKGKRIGFGLTGSHCTYEAVFPQIEALVNEGAEVRPVVTFNVKSTNT 50
.|||||||||||||||||||.||||||||:::|||||||||..|:||:|
RBAM_016580__ 1 -MSLKGKRIGFGLTGSHCTYEEVFPQIEALISQGAEVRPVVTSTVQSTDT 49
BSNT_02717___ 51 RFGEGAEWVKKIEDLTGYEAIDSIVKAEPLGPKLPLDCMVIAPLTGNSMS 100
|||||.:||:|||:.||:||||||||||||||||||||||||||||||||
RBAM_016580__ 50 RFGEGGDWVRKIEEATGFEAIDSIVKAEPLGPKLPLDCMVIAPLTGNSMS 99
BSNT_02717___ 101 KLANAMTDSPVLMAAKATIRNNRPVVLGISTNDALGLNGTNLMRLMSTKN 150
|||||||||||||||||||||.|||||||||||.|||||||||||||.||
RBAM_016580__ 100 KLANAMTDSPVLMAAKATIRNGRPVVLGISTNDGLGLNGTNLMRLMSAKN 149
BSNT_02717___ 151 IFFIPFGQDDPFKKPNSMVAKMDLLPQTIEKALMHQQLQPILVENYQGND 200
|:||||||||..|||.|:||:|||||.|:||||:|||:||:||.:::
RBAM_016580__ 150 IYFIPFGQDDHVKKPTSLVARMDLLPITVEKALLHQQVQPVLVHHHE--- 196
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