Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02572 and RBAM_015460

See DNA alignment / Visit BSNT_02572 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02572___ylnF.1.9828.seq
#    -bsequence pep-align/RBAM_015460___ylnF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02572___ylnF-RBAM_015460___ylnF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02572___ylnF-RBAM_015460___ylnF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02572___ylnF
# 2: RBAM_015460___ylnF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:     102/162 (63.0%)
# Similarity:   132/162 (81.5%)
# Gaps:           0/162 ( 0.0%)
# Score: 530.0
# 
#
#=======================================

BSNT_02572___      1 MLPLHISLEKKKVVIAGGGSIALRRLKSVISEGADITLVSPDVEPEIKQM     50
                     ||||||:|..|:::|||||::||||||:|:.||||||::|||..|||||:
RBAM_015460__      1 MLPLHINLSGKRIIIAGGGNVALRRLKTVLPEGADITVISPDALPEIKQL     50

BSNT_02572___     51 AEERRIKWEKRTIEKEDYLNAFFIIAATDNAAVNKEIAQSASPFQLVNCV    100
                     |:|.||:|..|.||.:|...||||||||::.:||:|||.|||..||||||
RBAM_015460__     51 ADEGRIRWVSRKIEMKDLAPAFFIIAATNDCSVNQEIAASASETQLVNCV    100

BSNT_02572___    101 SDAELGNVYMPKIVKRGHVTVSVSTSGASPKHTKELAENVDKLIDGDFIA    150
                     ||||.|:||||||:::|.:.||||||||||.|||.|||:::.||..|...
RBAM_015460__    101 SDAEQGSVYMPKIIRKGRIQVSVSTSGASPAHTKRLAEDIEPLITADLAE    150

BSNT_02572___    151 EVNRLYQVRRKK    162
                     ||:||::.||:.
RBAM_015460__    151 EVDRLFEKRRRL    162


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