Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02470 and RBAM_014730

See DNA alignment / Visit BSNT_02470 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_02470___ctaA.1.9828.seq
#    -bsequence pep-align/RBAM_014730___ctaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02470___ctaA-RBAM_014730___ctaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02470___ctaA-RBAM_014730___ctaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02470___ctaA
# 2: RBAM_014730___ctaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     261/308 (84.7%)
# Similarity:   284/308 (92.2%)
# Gaps:           2/308 ( 0.6%)
# Score: 1369.0
# 
#
#=======================================

BSNT_02470___      1 MNKALKALGVLTTFVMLIVLIGGALVTKTGSGQGCGRQWPLCHGRFFPEL     50
                     |||||||||||||||||:||||||||||||||.|||||||||||||||||
RBAM_014730__      1 MNKALKALGVLTTFVMLVVLIGGALVTKTGSGLGCGRQWPLCHGRFFPEL     50

BSNT_02470___     51 NPASIIEWSHRFASGISIILVLSLAFWSWRKITPIFRETTFLAIMSIIFL    100
                     |.|||||||||.|||:||:||||||||:|||:||:|||||||||||||||
RBAM_014730__     51 NAASIIEWSHRLASGVSIVLVLSLAFWAWRKVTPVFRETTFLAIMSIIFL    100

BSNT_02470___    101 FLQALLGALAVVFGSNALIMALHFGISLISFASVLILTLLIFEADKSVRT    150
                     ||||||||||||||||||:||||||||||||||||||||||||||||.:.
RBAM_014730__    101 FLQALLGALAVVFGSNALVMALHFGISLISFASVLILTLLIFEADKSDKK    150

BSNT_02470___    151 LVKPLQIGKKMQFHMIGILIYSYIVVYTGAYVRHTESSLACPDVPLCSPL    200
                     |||||:||:||||||||:.||:|||||||||||||:||||||||||||.|
RBAM_014730__    151 LVKPLRIGRKMQFHMIGLSIYTYIVVYTGAYVRHTKSSLACPDVPLCSRL    200

BSNT_02470___    201 NNGLPTQFHEWVQMGHRAAALLLFVWIIVAAVHAITSYKDQKQIFWGWIS    250
                     |:|||:.|.||||||||.|||||||||:||..||:.||||||||..|||:
RBAM_014730__    201 NHGLPSHFQEWVQMGHRTAALLLFVWILVAFAHAVRSYKDQKQILGGWIA    250

BSNT_02470___    251 CLIFITLQALSGIMIVYTELALGFALAHSFFIACLFGVLCYFLLLIARFR    300
                     .|.|:.||||||||:||:|:|.|||||||.|||.||||||||||||||||
RBAM_014730__    251 ALAFVVLQALSGIMVVYSEMATGFALAHSLFIAGLFGVLCYFLLLIARFR    300

BSNT_02470___    301 YESRQS--    306
                     |||:|.  
RBAM_014730__    301 YESKQRNI    308


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.