Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02470 and RBAM_014730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_02470___ctaA.1.9828.seq
# -bsequence dna-align/RBAM_014730___ctaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02470___ctaA-RBAM_014730___ctaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02470___ctaA-RBAM_014730___ctaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02470___ctaA
# 2: RBAM_014730___ctaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity: 721/942 (76.5%)
# Similarity: 721/942 (76.5%)
# Gaps: 36/942 ( 3.8%)
# Score: 2724.0
#
#
#=======================================
BSNT_02470___ 1 ATGAATAAAGCATTAAAAGCTCTCGGTGTTCTGACGACATTTGTCATGCT 50
|||||||||||.||.|||||.|||||.||.|||||||||||.||.|||||
RBAM_014730__ 1 ATGAATAAAGCTTTGAAAGCGCTCGGCGTGCTGACGACATTCGTTATGCT 50
BSNT_02470___ 51 AATTGTTTTAATCGGGGGTGCCCTCGTTACAAAAACAGGTTCCGGCCAAG 100
..|.||..|.|||||.||.||.||.||.|||||.|||||.||.||.|..|
RBAM_014730__ 51 CGTCGTGCTGATCGGCGGCGCTCTTGTCACAAAGACAGGATCGGGTCTCG 100
BSNT_02470___ 101 GATGCGGCAGACAGTGGCCGCTGTGTCACGGCCGTTTTTTCCCTGAACTG 150
|||||||.||.|||||||||||.||.||||||||.||||||||.||.||.
RBAM_014730__ 101 GATGCGGAAGGCAGTGGCCGCTTTGCCACGGCCGGTTTTTCCCGGAGCTT 150
BSNT_02470___ 151 AATCCGGCTTCAATTATTGAATGGAGCCACCGATTCGCAAGCGGAATCTC 200
||..|.|||||.||.|||||||||||||||.||.||||||||||..||||
RBAM_014730__ 151 AACGCCGCTTCTATCATTGAATGGAGCCACAGACTCGCAAGCGGTGTCTC 200
BSNT_02470___ 201 TATTATCCTTGTGCTAAGCCTTGCGTTTTGGTCATGGAGAAAAATCACGC 250
.||..|.||.|||||.||.||.||.||||||.|||||||||||.||||||
RBAM_014730__ 201 AATCGTTCTCGTGCTGAGTCTCGCTTTTTGGGCATGGAGAAAAGTCACGC 250
BSNT_02470___ 251 CGATTTTTCGTGAAACAACGTTTCTCGCGATCATGTCAATTATCTTTTTA 300
|..||||.|||||||||||.||||||||.||.|||||.||||||||||||
RBAM_014730__ 251 CTGTTTTCCGTGAAACAACCTTTCTCGCCATTATGTCCATTATCTTTTTA 300
BSNT_02470___ 301 TTTCTTCAGGCATTGCTTGGCGCATTGGCTGTCGTATTCGGTTCGAACGC 350
|||.|.|||||..|.||.||||||||.||.||.||.|||||.||.||.||
RBAM_014730__ 301 TTTTTACAGGCGCTTCTCGGCGCATTAGCGGTTGTTTTCGGATCAAATGC 350
BSNT_02470___ 351 GCTGATTATGGCGCTTCACTTCGGCATCTCATTAATTTCTTTTGCTTCAG 400
|||..|||||||||||||.||||||||.||..|.||||||||.|||||.|
RBAM_014730__ 351 GCTCGTTATGGCGCTTCATTTCGGCATATCGCTGATTTCTTTCGCTTCTG 400
BSNT_02470___ 401 TGCTTATTTTAACATTGCTCATATTTGAAGCTGATAAATCAGTCAGAACA 450
|.||.|||||.||..||||||||||.||||||||||||||||.||.||..
RBAM_014730__ 401 TTCTGATTTTGACGCTGCTCATATTCGAAGCTGATAAATCAGACAAAAAG 450
BSNT_02470___ 451 CTGGTTAAGCCGCTTCA-AATCGGCAAAAAGATGCAATTTCACATGATAG 499
||.||.||||||| ||| ||||||||.|||.|||||.|||||.|||||.|
RBAM_014730__ 451 CTCGTCAAGCCGC-TCAGAATCGGCAGAAAAATGCAGTTTCATATGATCG 499
BSNT_02470___ 500 GAATTTTGATATATTCCTATATCGTTGTGTATACAGGCGCATATGTAAGA 549
|..|||.|||.||..|.||||||||.||.|||||.||.||.||||||.|.
RBAM_014730__ 500 GTCTTTCGATTTACACGTATATCGTCGTTTATACGGGGGCTTATGTACGC 549
BSNT_02470___ 550 CACACTGAATCAAGTCTGGCATGTCCTGATGTGCCGCTGTGCAGCCCGCT 599
||.||..|||||||.||.||.||.|||||.||.|||||.||||||..|||
RBAM_014730__ 550 CATACGAAATCAAGCCTTGCCTGCCCTGACGTTCCGCTTTGCAGCAGGCT 599
BSNT_02470___ 600 GAACAATGGGCTTCCGACCCAATTCCATGAATGGGTGCAAATGGGCCACA 649
|||..|.|||||||||.|.||.||.||.|||||||||||.||||||||||
RBAM_014730__ 600 GAATCACGGGCTTCCGTCTCATTTTCAGGAATGGGTGCAGATGGGCCACA 649
BSNT_02470___ 650 GAGCAGCAGC----CTTACTGTTATTTGTATGGATTATTGTTGCCGCTGT 695
||.|.||||| ||| ||| ||.|||||||||.|||| ||||.|
RBAM_014730__ 650 GAACGGCAGCGCTGCTT-CTG---TTCGTATGGATTCTTGT---CGCTTT 692
BSNT_02470___ 696 T---CATGCTATTACTTCCTATAAAGATCAAAAACAAATCTTTTGGGGTT 742
| |||||..|....|||||.||||||||||||||.||..||.||||.|
RBAM_014730__ 693 TGCGCATGCGGTGCGCTCCTACAAAGATCAAAAACAGATTCTTGGGGGCT 742
BSNT_02470___ 743 GGAT-----CTCATGTCTTATTTTTATTACATTACAGGCACTGTCCGGTA 787
|||| |||.||.| |||.||..|||||||||.||.|||||.|
RBAM_014730__ 743 GGATAGCGGCTCTTGCC-----TTTGTTGTATTACAGGCGCTCTCCGGAA 787
BSNT_02470___ 788 TTATGATCGTATACACTGAACTCGCTCTGGGTTTTGCACTTGCCCACTCG 837
|.|||.|.||.||..|.|||.|.||....||.||||||||||||||.|||
RBAM_014730__ 788 TCATGGTTGTTTATTCAGAAATGGCCACCGGCTTTGCACTTGCCCATTCG 837
BSNT_02470___ 838 TTCTTTATTGCCTGTCTGTTTGGCGTTCTATGCTACTTCTTATTATTGAT 887
.|||||||||||.|.|||||||||||..|||||||.|||||||||||.||
RBAM_014730__ 838 CTCTTTATTGCCGGCCTGTTTGGCGTCTTATGCTATTTCTTATTATTAAT 887
BSNT_02470___ 888 TGCTCGTTTCCGTTATGAATC----CAG-GCAATCAT---AA 921
.||.||.|||||.|||||||| ||| |.|| ||| |
RBAM_014730__ 888 CGCCCGCTTCCGCTATGAATCAAAACAGCGGAA-CATCTGA- 927
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