Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02349 and RBAM_013810

See DNA alignment / Visit BSNT_02349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_02349___ykyB.1.9828.seq
#    -bsequence pep-align/RBAM_013810___ykyB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02349___ykyB-RBAM_013810___ykyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02349___ykyB-RBAM_013810___ykyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02349___ykyB
# 2: RBAM_013810___ykyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     143/154 (92.9%)
# Similarity:   151/154 (98.1%)
# Gaps:           0/154 ( 0.0%)
# Score: 774.0
# 
#
#=======================================

BSNT_02349___      1 MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVK     50
                     ||||||:|:||||:||||||||||||||||||||||||||||||||||||
RBAM_013810__      1 MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVK     50

BSNT_02349___     51 EGKGKKIGLHFSKNPRFSQQQSDVLISIGDYYFHMPPTKEDFEHLPHLGT    100
                     ||||||||||||.|||||||||||||||||||||||||||||:|||||||
RBAM_013810__     51 EGKGKKIGLHFSNNPRFSQQQSDVLISIGDYYFHMPPTKEDFQHLPHLGT    100

BSNT_02349___    101 LNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLG    150
                     ||||||||||||||||||::||:|||:|||||..||||||||||||||||
RBAM_013810__    101 LNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLG    150

BSNT_02349___    151 ESYF    154
                     ||||
RBAM_013810__    151 ESYF    154


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