Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02349 and RBAM_013810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02349___ykyB.1.9828.seq
# -bsequence dna-align/RBAM_013810___ykyB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02349___ykyB-RBAM_013810___ykyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02349___ykyB-RBAM_013810___ykyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02349___ykyB
# 2: RBAM_013810___ykyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity: 412/467 (88.2%)
# Similarity: 412/467 (88.2%)
# Gaps: 4/467 ( 0.9%)
# Score: 1835.0
#
#
#=======================================
BSNT_02349___ 1 ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCT 50
|||||||||||.||.|||.|||||||.||||||||||||.|.||.|||||
RBAM_013810__ 1 ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCT 50
BSNT_02349___ 51 TTCAAAAGCAGTTTACACTGTGAACCGCCATGCAAAAACCGCCCCCAACC 100
|||||||||.|||||.||||||||||||||||||||||||||||||||||
RBAM_013810__ 51 TTCAAAAGCTGTTTATACTGTGAACCGCCATGCAAAAACCGCCCCCAACC 100
BSNT_02349___ 101 CTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAA 150
||||||||||.||||||||||||||||||||.||.|||||||||||.|||
RBAM_013810__ 101 CTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAA 150
BSNT_02349___ 151 GAAGGTAAAGGAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTT 200
|||||.|||||.||.||||||||||||||.||||||||.|||||.|||||
RBAM_013810__ 151 GAAGGCAAAGGGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTT 200
BSNT_02349___ 201 CAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGACTACTATTTTC 250
.|||||||||||.||.|||||.||||||||.|||||||||||||||||||
RBAM_013810__ 201 TAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGACTACTATTTTC 250
BSNT_02349___ 251 ACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACA 300
|||||||||||||.||||||||||||.|.||||||||||||||||||||.
RBAM_013810__ 251 ACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACG 300
BSNT_02349___ 301 CTTAATCAATCGTACCGAAATCCTAAAGCTCAAATGTCTTTAACAAAAGC 350
.|.||||||||||||||.|||||||||||.|||||||||||.||||||||
RBAM_013810__ 301 TTAAATCAATCGTACCGCAATCCTAAAGCACAAATGTCTTTGACAAAAGC 350
BSNT_02349___ 351 GAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC 400
||||.||.||||||||.|||||||.|||.|.||.|||||.||||| |||
RBAM_013810__ 351 GAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCT--TGC 398
BSNT_02349___ 401 --CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTG 448
|.||..|.||||||||.|||||.||||||||.||.|||||||||||||
RBAM_013810__ 399 CGCCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTG 448
BSNT_02349___ 449 GCGAGAGTTACTTTTAA 465
|.||||||||.||||||
RBAM_013810__ 449 GTGAGAGTTATTTTTAA 465
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