Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02100 and RBAM_012430

See DNA alignment / Visit BSNT_02100 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02100___yjnA.1.9828.seq
#    -bsequence pep-align/RBAM_012430___yjnA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02100___yjnA-RBAM_012430___yjnA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02100___yjnA-RBAM_012430___yjnA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02100___yjnA
# 2: RBAM_012430___yjnA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     207/254 (81.5%)
# Similarity:   232/254 (91.3%)
# Gaps:           0/254 ( 0.0%)
# Score: 1074.0
# 
#
#=======================================

BSNT_02100___      1 MSVSIILMGLFVGALVGLTGVGGAALLTPLLIVLGINPSIAVGTDLVYNS     50
                     |:|||:.||.|||.||||||||||||||||||||||||||||||||:|||
RBAM_012430__      1 MTVSIVFMGFFVGTLVGLTGVGGAALLTPLLIVLGINPSIAVGTDLLYNS     50

BSNT_02100___     51 ITKLFGVASHWRQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQE    100
                     |||||||.|||:|:|:.||||.|||:||||||:.|||:||||||||||||
RBAM_012430__     51 ITKLFGVVSHWKQRTVQFKLVGYLALGSIPSATAAIGVLHLFPAFHQHQE    100

BSNT_02100___    101 EIIKHALGYVLTLVAISIIVRLFLDRKLRPNRWQLMPLENKRALTILIGV    150
                     :|||.||||||||||||||.|||.|:||||||||...||.||.|.|||||
RBAM_012430__    101 QIIKQALGYVLTLVAISIIARLFFDKKLRPNRWQQKTLEEKRTLMILIGV    150

BSNT_02100___    151 VFGFIVGLTSIGSGSLFAIAMIYLFNMKASQIVGTDIAHAFLLVTAAGIL    200
                     :||||||||||||||||||||:|||.||.:::||||||||||||||||:|
RBAM_012430__    151 IFGFIVGLTSIGSGSLFAIAMLYLFRMKTAEVVGTDIAHAFLLVTAAGLL    200

BSNT_02100___    201 NASFGSVDYMLAANLLIGSIPGVLIGSHLSPRFSPRPLQFIMASIILVSG    250
                     |||||||||:|..||||||:||||:||..||:||||||||:||:|||:||
RBAM_012430__    201 NASFGSVDYLLVLNLLIGSVPGVLLGSFFSPKFSPRPLQFVMAAIILISG    250

BSNT_02100___    251 LKLI    254
                     :|||
RBAM_012430__    251 IKLI    254


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