Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01896 and RBAM_011310

See DNA alignment / Visit BSNT_01896 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_01896___comZ.1.9828.seq
#    -bsequence pep-align/RBAM_011310___comZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01896___comZ-RBAM_011310___comZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01896___comZ-RBAM_011310___comZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01896___comZ
# 2: RBAM_011310___comZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      50/63 (79.4%)
# Similarity:    57/63 (90.5%)
# Gaps:           0/63 ( 0.0%)
# Score: 252.0
# 
#
#=======================================

BSNT_01896___      1 MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEA     50
                     |||||||||:|||||||||||.:||||||:||||.|||||:|||:|||||
RBAM_011310__      1 MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEA     50

BSNT_01896___     51 YELGKSDAKSETE     63
                     ||||:|||....:
RBAM_011310__     51 YELGRSDAGELNK     63


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