Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01896 and RBAM_011310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_01896___comZ.1.9828.seq
# -bsequence dna-align/RBAM_011310___comZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01896___comZ-RBAM_011310___comZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01896___comZ-RBAM_011310___comZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01896___comZ
# 2: RBAM_011310___comZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 150/195 (76.9%)
# Similarity: 150/195 (76.9%)
# Gaps: 6/195 ( 3.1%)
# Score: 562.5
#
#
#=======================================
BSNT_01896___ 1 ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCT 50
||||||||.|||||.||.||||||||..||||.||.||.||||||||.||
RBAM_011310__ 1 ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCT 50
BSNT_01896___ 51 CCCTGAAGCGAAAGAACAGCTTGAGAAATCAGGCATTGAGCTCTCAATGG 100
.||.|||||.||.|...|||||||||||||.|||||.||.||.||.||||
RBAM_011310__ 51 GCCGGAAGCAAAGGCGGAGCTTGAGAAATCCGGCATAGATCTGTCTATGG 100
BSNT_01896___ 101 AGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCT 150
|....||.||||||||||||.|.||.||||||.||||.|||||||||||.
RBAM_011310__ 101 AAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCG 150
BSNT_01896___ 151 TATGAGCTTGGCAAGTCTGACGC--TAAATCTGAA-ACAGAATAA 192
|||||||||||||..|||||.|| ...|.||||| | |||||
RBAM_011310__ 151 TATGAGCTTGGCAGATCTGATGCCGGGGAGCTGAATA---AATAA 192
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