Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01868 and RBAM_011110

See DNA alignment / Visit BSNT_01868 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_01868.1.9828.seq
#    -bsequence pep-align/RBAM_011110.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01868-RBAM_011110.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01868-RBAM_011110.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01868
# 2: RBAM_011110
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      56/65 (86.2%)
# Similarity:    62/65 (95.4%)
# Gaps:           0/65 ( 0.0%)
# Score: 288.0
# 
#
#=======================================

BSNT_01868         1 MRNELFQQAKSFVQQAVMVTNGFEEGDQEQAILRAKNAVSSAYANSTDAE     50
                     ||||||.|||||||||||:.||||:||||:|:.|||||||||||||||||
RBAM_011110        1 MRNELFSQAKSFVQQAVMIANGFEDGDQEKAVSRAKNAVSSAYANSTDAE     50

BSNT_01868        51 RQQLHQFQNQLDKLQ     65
                     ||||||||:||:|||
RBAM_011110       51 RQQLHQFQDQLEKLQ     65


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