Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01868 and RBAM_011110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_01868.1.9828.seq
# -bsequence dna-align/RBAM_011110.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01868-RBAM_011110.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01868-RBAM_011110.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01868
# 2: RBAM_011110
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 161/200 (80.5%)
# Similarity: 161/200 (80.5%)
# Gaps: 4/200 ( 2.0%)
# Score: 634.5
#
#
#=======================================
BSNT_01868 1 ATGAGAAATGAACTGTTTCAGCAGGCAAAATCATTTGTTCAACAGGCGGT 50
||||||||.|||||||||...||.||.||.||||||||.||.|||||.||
RBAM_011110 1 ATGAGAAACGAACTGTTTTCTCAAGCCAAGTCATTTGTCCAGCAGGCCGT 50
BSNT_01868 51 CATGGTGACAAACGGCTTTGAGGAAGGCGATCAGGAGCAAGC-GATTCTG 99
||||.|..|.|||||.||.|||||.|||||||||||..|||| |.|||
RBAM_011110 51 CATGATTGCTAACGGTTTCGAGGACGGCGATCAGGAAAAAGCTGTTTC-- 98
BSNT_01868 100 A-GAGCCAAAAATGCTGTATCTTCTGCGTATGCCAATTCGACAGATGCGG 148
| |.||||||||.||.||.|||||.|||||.|||||||||||.|||||.|
RBAM_011110 99 ACGCGCCAAAAACGCCGTGTCTTCCGCGTACGCCAATTCGACGGATGCAG 148
BSNT_01868 149 AACGTCAACAGCTGCATCAATTTCAAAATCAGCTGGACAAACTCCAATAA 198
|||||||.||||||||.||||||||..||||||||||.|||.|.||||||
RBAM_011110 149 AACGTCAGCAGCTGCACCAATTTCAGGATCAGCTGGAGAAATTGCAATAA 198
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