Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01865 and RBAM_011080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence pep-align/BSNT_01865___yitS.1.9828.seq
# -bsequence pep-align/RBAM_011080___yitS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01865___yitS-RBAM_011080___yitS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01865___yitS-RBAM_011080___yitS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01865___yitS
# 2: RBAM_011080___yitS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 217/283 (76.7%)
# Similarity: 249/283 (88.0%)
# Gaps: 0/283 ( 0.0%)
# Score: 1134.0
#
#
#=======================================
BSNT_01865___ 1 MTVHLIADSATDLPRSYFEEKGIGFIPLRVSLGDKEFEDAVTIHADQIFE 50
||||||||||:|||:||.||..||||||.|:|...|:||.|||.||.||:
RBAM_011080__ 1 MTVHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQ 50
BSNT_01865___ 51 AMQNGETPKTSQASPHTIKNVFLQYAETGDPALYIAFSSGLSGTYQTAVM 100
||::|:.||||||||.|||.|||||||.|:||:|||||||||||||||||
RBAM_011080__ 51 AMRDGKVPKTSQASPDTIKKVFLQYAELGEPAIYIAFSSGLSGTYQTAVM 100
BSNT_01865___ 101 IANEVKEEFPDFDLRVIDSKCASLGYGLAVQHVADLCINGNTIQEIETSV 150
|||||||||||||||::||||||||.||||.|...||:||||||||||||
RBAM_011080__ 101 IANEVKEEFPDFDLRIVDSKCASLGCGLAVMHAQTLCVNGNTIQEIETSV 150
BSNT_01865___ 151 KNFCSQLEHIFTVDDLTYLARGGRISKTSAFVGGLLNIKPLLQMEDGKLV 200
|:||::::|||||||:.|||||||||||||||||||||||:|.::||:||
RBAM_011080__ 151 KSFCARMKHIFTVDDVAYLARGGRISKTSAFVGGLLNIKPILHVDDGRLV 200
BSNT_01865___ 201 PLEKIRGQKKLFKRIIELMKERGDDLSNQTVGISYAANKEKATDMKHLIE 250
||||:||||||||||||.|||.|.|.::||||||||.|:|.|..||.:||
RBAM_011080__ 201 PLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEETALRMKEMIE 250
BSNT_01865___ 251 EAFKPKEIIMHPISSAIGSHAGPGTLAIFFLRK 283
|||.|||||:|.|.||||:|:||||||||||:.
RBAM_011080__ 251 EAFHPKEIILHSIGSAIGAHSGPGTLAIFFLKP 283
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