Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01538 and RBAM_009360

See DNA alignment / Visit BSNT_01538 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_01538___yhcI.1.9828.seq
#    -bsequence pep-align/RBAM_009360___yhcI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01538___yhcI-RBAM_009360___yhcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01538___yhcI-RBAM_009360___yhcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01538___yhcI
# 2: RBAM_009360___yhcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     225/315 (71.4%)
# Similarity:   273/315 (86.7%)
# Gaps:           2/315 ( 0.6%)
# Score: 1209.5
# 
#
#=======================================

BSNT_01538___      1 MLNLIYNEWLKIFSRAGTWVMIGILGLTMVGFAFLANHFSAGESNSHWKQ     50
                     |..||||||:|||||.|||.||.|||::|:|||.|:|||::.|::.:|||
RBAM_009360__      1 MFKLIYNEWIKIFSRVGTWAMIVILGVSMIGFALLSNHFTSSEASPNWKQ     50

BSNT_01538___     51 ELQAQNAELKKEIKE--DPSLKDGYKETITLNDYRIEHNIPSDTGYTVWS     98
                     ||||:|.|:|:::||  :.:|.|..|:.:.:|.||::||||.||||||||
RBAM_009360__     51 ELQAENKEMKQQMKETGNQTLIDNLKQNVAINQYRMDHNIPEDTGYTVWS    100

BSNT_01538___     99 YVTDSANFTILTGLFTIIIAAGIVANEFNWGTIKLLMIRPLSRFQILMSK    148
                     ||.||:..|:||||||||||||||||||||||||||.||||||||||:||
RBAM_009360__    101 YVADSSMMTVLTGLFTIIIAAGIVANEFNWGTIKLLAIRPLSRFQILLSK    150

BSNT_01538___    149 YITVLLFGLLLLLILFIGSTLLGLIFFGTGGETAANIHLIYKDGHVIEQN    198
                     |:||||||||:|:|||.||.||||:||||||:|||::||:||||.|.|||
RBAM_009360__    151 YMTVLLFGLLMLVILFAGSALLGLVFFGTGGDTAADVHLVYKDGQVFEQN    200

BSNT_01538___    199 MMGHLATTYLSESVSALMVATMAFMLSAVFRNSSLAVGFSIFLLVAGTIA    248
                     ::..||.||:.|||||.|:||||||||||||||||||||||||||.|..|
RBAM_009360__    201 IIAFLAKTYVYESVSAFMLATMAFMLSAVFRNSSLAVGFSIFLLVMGNTA    250

BSNT_01538___    249 TAFIAAKFDWAKYILFANVDLTQYVDGTPLIKGMTMTFSLVMLAIYFIIF    298
                     |.|:|.||:|.|||||||.||:||::||||::|||||||:|||.|||:||
RBAM_009360__    251 TVFLATKFEWTKYILFANTDLSQYMNGTPLVEGMTMTFSVVMLVIYFVIF    300

BSNT_01538___    299 LLLAFGIFMKRDIAN    313
                     |.||||:|:|||||.
RBAM_009360__    301 LALAFGVFLKRDIAT    315


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