Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01337 and RBAM_008240

See DNA alignment / Visit BSNT_01337 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:02
# Commandline: needle
#    -asequence pep-align/BSNT_01337___yfjP.1.9828.seq
#    -bsequence pep-align/RBAM_008240___yfjP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01337___yfjP-RBAM_008240___yfjP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01337___yfjP-RBAM_008240___yfjP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01337___yfjP
# 2: RBAM_008240___yfjP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     223/287 (77.7%)
# Similarity:   254/287 (88.5%)
# Gaps:           0/287 ( 0.0%)
# Score: 1214.0
# 
#
#=======================================

BSNT_01337___      1 MWKEKVSVTPPYHFDRVLDRLSLDPLNAVDREAREVRVPIRNQAGDVCIV     50
                     ||||.||||||||||:||:|||||||||||..||.::||:|.:.|.:.::
RBAM_008240__      1 MWKETVSVTPPYHFDKVLERLSLDPLNAVDLHARSIKVPLRTRDGKLSVI     50

BSNT_01337___     51 KVQALGHAGDPEFLVSGETDQGEMMKEIKRIFQWENHLQHVLDHFSKTSL    100
                     .|||.|.:.||.||||||||:.||::.||.|||||..||.||||||||:|
RBAM_008240__     51 TVQAEGTSADPVFLVSGETDREEMIERIKHIFQWEQPLQPVLDHFSKTNL    100

BSNT_01337___    101 SAIFEEHAGTPLVLDYSVYNCMMKCIIHQQLNLSFAYTLTERFVHAFGEQ    150
                     |.:|||||||||||:|.||||:||||||||||||||:|||||||||||||
RBAM_008240__    101 SGLFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQ    150

BSNT_01337___    151 KDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAEGTLSLSE    200
                     ||||||||:|:||..|:|||||:||||||||||.||.|||||||.|:|:|
RBAM_008240__    151 KDGVWCYPEPKTITGLEYQDLRELQFSMRKAEYAIDISRMIAEGALNLAE    200

BSNT_01337___    201 LPHMADEDIMKKLIKIRGIGPWTVQNILMFGLGRPNLFPLADIGLQNAIK    250
                     |.|::|||||||||.|||||||||||:|||||||||||||||||||||:|
RBAM_008240__    201 LTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAVK    250

BSNT_01337___    251 RHFQLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE    287
                     |.|.|:|||:|||||.:|.||.|||||||||||||||
RBAM_008240__    251 RRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE    287


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