Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03873 and RBAM_005610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence pep-align/BSNT_03873___trkA.1.9828.seq
# -bsequence pep-align/RBAM_005610___trkA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03873___trkA-RBAM_005610___trkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03873___trkA-RBAM_005610___trkA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03873___trkA
# 2: RBAM_005610___trkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 305/345 (88.4%)
# Similarity: 330/345 (95.7%)
# Gaps: 0/345 ( 0.0%)
# Score: 1620.0
#
#
#=======================================
BSNT_03873___ 1 MYDTIVIGAGQAGISIGYYFKQSDQKFIILDKSHEVGESWKDRYDSLVLF 50
|||||||||||||||:|||.|:|.|||||||||||||||||:||||||||
RBAM_005610__ 1 MYDTIVIGAGQAGISVGYYLKKSKQKFIILDKSHEVGESWKNRYDSLVLF 50
BSNT_03873___ 51 TSRMYSSLPGMHLEGDKHGFPTKNEIVAYLKKYVEKFEIPIQLRTEVISV 100
|||||||||||.|||||||.|:||||.||||||||:||||||||||||||
RBAM_005610__ 51 TSRMYSSLPGMQLEGDKHGLPSKNEIAAYLKKYVERFEIPIQLRTEVISV 100
BSNT_03873___ 101 LKIKNYFLIKTNREEYQTKNLVIATGPFHTPNIPSISKDLFDNINQLHSS 150
.|:|||||||||||||||||||:|.||||||||||||:|:.|:|:|||||
RBAM_005610__ 101 QKLKNYFLIKTNREEYQTKNLVMAAGPFHTPNIPSISRDVADHIHQLHSS 150
BSNT_03873___ 151 QYKNSKQLAYGNVLVVGGGNSGAQIAVELSKERVTYLACSNKLVYFPLMI 200
|||:|||||.||||||||||||||||||||||||||||||||.|||||.|
RBAM_005610__ 151 QYKHSKQLAPGNVLVVGGGNSGAQIAVELSKERVTYLACSNKPVYFPLWI 200
BSNT_03873___ 201 GKRSIFWWFDKLGVLHASHTSIVGKFIQKKGDPVFGHELKHAIKQKEIIL 250
||||||||||||||||||||||:||||||||||:||:||||||:||:|||
RBAM_005610__ 201 GKRSIFWWFDKLGVLHASHTSILGKFIQKKGDPIFGYELKHAIRQKKIIL 250
BSNT_03873___ 251 KKRVIAAKQNEIIFKDSSTLEVNNIIWATGFRNPLCWINIKGVLDQEGRI 300
|:||||.||||:||||||:||||||||||||:|||||:.|:||||:||||
RBAM_005610__ 251 KQRVIAGKQNEMIFKDSSSLEVNNIIWATGFKNPLCWMKIEGVLDKEGRI 300
BSNT_03873___ 301 IHHRGVSPVEGLYFIGLPWQHKRGSALLQGVGNDAEYIVKQMNGE 345
|||||||.|||||||||||||:||||||||||||||||||||||.
RBAM_005610__ 301 IHHRGVSAVEGLYFIGLPWQHRRGSALLQGVGNDAEYIVKQMNGG 345
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