Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00344 and RBAM_002280

See DNA alignment / Visit BSNT_00344 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence pep-align/BSNT_00344___ybbP.1.9828.seq
#    -bsequence pep-align/RBAM_002280___ybbP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00344___ybbP-RBAM_002280___ybbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00344___ybbP-RBAM_002280___ybbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00344___ybbP
# 2: RBAM_002280___ybbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     262/273 (96.0%)
# Similarity:   267/273 (97.8%)
# Gaps:           0/273 ( 0.0%)
# Score: 1329.0
# 
#
#=======================================

BSNT_00344___      1 MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002280__      1 MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLV     50

BSNT_00344___     51 RMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSR    100
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_002280__     51 RMASSYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSR    100

BSNT_00344___    101 SGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERDTGMGDYIETGIPL    150
                     |||||||||.||||||||:|:||||||||||:.|||||||||||||||||
RBAM_002280__    101 SGTPVEEAQHKTIEAITKSISYMAKRRIGALIAIERDTGMGDYIETGIPL    150

BSNT_00344___    151 NAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKEL    200
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002280__    151 NAQVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKEL    200

BSNT_00344___    201 GTXHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLE    250
                     || |||||||||||||||||||||||.:||||||||||||||||||||||
RBAM_002280__    201 GTRHRAAVGISEVTDSLTIIVSEETGAISVAKNGDLHRELTEEALKEMLE    250

BSNT_00344___    251 AEFKKNTRDTSSNRWYWRGKKNG    273
                     ||||||.||||||||||||||||
RBAM_002280__    251 AEFKKNARDTSSNRWYWRGKKNG    273


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