Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00344 and RBAM_002280

See Amino acid alignment / Visit BSNT_00344 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence dna-align/BSNT_00344___ybbP.1.9828.seq
#    -bsequence dna-align/RBAM_002280___ybbP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00344___ybbP-RBAM_002280___ybbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00344___ybbP-RBAM_002280___ybbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00344___ybbP
# 2: RBAM_002280___ybbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     710/822 (86.4%)
# Similarity:   710/822 (86.4%)
# Gaps:           0/822 ( 0.0%)
# Score: 3104.0
# 
#
#=======================================

BSNT_00344___      1 ATGGCTTTTGAGGATATCCCTTTTTTGCAGTACCTCGGCAATGCCGTTGA     50
                     ||||||||||||||.|||||.||||||||.||||||||||||||||||||
RBAM_002280__      1 ATGGCTTTTGAGGACATCCCATTTTTGCAATACCTCGGCAATGCCGTTGA     50

BSNT_00344___     51 TATTCTCCTTGTTTGGTATGTGATATATAAATTGATTATGGTGATACGCG    100
                     |||||||||||||||||||||||||||||||||.||||||||.|||||||
RBAM_002280__     51 TATTCTCCTTGTTTGGTATGTGATATATAAATTAATTATGGTCATACGCG    100

BSNT_00344___    101 GCACGAAAGCGGTTCAGCTGTTAAAAGGAATTGTAGTCATCGTGCTTGTT    150
                     |.|||||.|||||||||||.|||||||||||.||.||||||||..|.|||
RBAM_002280__    101 GGACGAAGGCGGTTCAGCTTTTAAAAGGAATCGTCGTCATCGTATTGGTT    150

BSNT_00344___    151 CGTATGGCCAGCCAATATTTGGGCCTCAGCACACTTCAATGGCTGATGGA    200
                     ||.||||||||...|||||||||.||||||||.|||||.|||||||||||
RBAM_002280__    151 CGGATGGCCAGTTCATATTTGGGACTCAGCACGCTTCAGTGGCTGATGGA    200

BSNT_00344___    201 CCAAGCGATAACATGGGGATTTTTAGCAATTATTATTATTTTTCAGCCTG    250
                     |||||||||||||||||||||||||||.||.||.|||||.||.|||||||
RBAM_002280__    201 CCAAGCGATAACATGGGGATTTTTAGCGATCATCATTATATTCCAGCCTG    250

BSNT_00344___    251 AGCTGAGAAGAGCGCTTGAACAGCTAGGCCGCGGCCGCTTTTTTTCGAGG    300
                     ||||||||.|.||||||||||||||.||.||.|||||.||.|||||.|||
RBAM_002280__    251 AGCTGAGACGGGCGCTTGAACAGCTCGGACGGGGCCGGTTCTTTTCCAGG    300

BSNT_00344___    301 AGCGGCACCCCTGTTGAAGAAGCGCAGCAGAAAACGATTGAGGCCATTAC    350
                     |||||.|||||.||.||.|||||||||||.||.||.|||||.||.|||||
RBAM_002280__    301 AGCGGAACCCCCGTGGAGGAAGCGCAGCATAAGACAATTGAAGCGATTAC    350

BSNT_00344___    351 AAAAGCGATCAATTATATGGCGAAACGCCGTATAGGCGCCCTGCTGACCA    400
                     ||||.||||||..||.||||||||||||||.||.|||||.||..|..|.|
RBAM_002280__    351 AAAATCGATCAGCTACATGGCGAAACGCCGCATCGGCGCACTCATCGCGA    400

BSNT_00344___    401 TTGAGCGGGATACTGGAATGGGGGATTATATTGAGACCGGCATACCACTA    450
                     |||||||.|||||.||||||||.||||||||||||||.|||||.||.||.
RBAM_002280__    401 TTGAGCGCGATACGGGAATGGGCGATTATATTGAGACGGGCATCCCGCTT    450

BSNT_00344___    451 AATGCCAAAGTCAGCTCTGAGCTGCTGATCAATATTTTTATTCCAAACAC    500
                     |||||..|.||||||||.|||||..||||.|||||.||.||.||.||.||
RBAM_002280__    451 AATGCGCAGGTCAGCTCGGAGCTTTTGATTAATATCTTCATCCCGAATAC    500

BSNT_00344___    501 CCCGCTTCATGATGGTGCGGTAATTATGAAAAATAATGAAATTGCCGCGG    550
                     .|||||.||||||||.|||||.||||||||||||||.||.|||||.||||
RBAM_002280__    501 ACCGCTGCATGATGGAGCGGTCATTATGAAAAATAACGAGATTGCGGCGG    550

BSNT_00344___    551 CCGCCTGTTATCTGCCGCTTTCTGAGAGCCCGTTTATTTCTAAAGAACTG    600
                     |.|||||||||||||||||||||||.||||||||||||||.||.||.|||
RBAM_002280__    551 CTGCCTGTTATCTGCCGCTTTCTGAAAGCCCGTTTATTTCAAAGGAGCTG    600

BSNT_00344___    601 GGCACGCGNCACAGAGCGGCAGTCGGTATCAGTGAAGTAACAGACAGTTT    650
                     ||.||||| |||||||||||.|||||.|||||||||||.||.|||||.||
RBAM_002280__    601 GGGACGCGGCACAGAGCGGCTGTCGGCATCAGTGAAGTGACGGACAGCTT    650

BSNT_00344___    651 GACGATTATTGTGTCTGAAGAGACCGGCGGCGTCAGTGTGGCAAAGAACG    700
                     .||.|||||.||.|||||||||||.||||.|.||||.|||||.||.||||
RBAM_002280__    651 AACCATTATCGTATCTGAAGAGACGGGCGCCATCAGCGTGGCCAAAAACG    700

BSNT_00344___    701 GCGACCTTCACAGAGAGCTTACAGAAGAAGCGCTGAAAGAAATGCTTGAA    750
                     |.||||||||||||||..|.||.||||||||.||||||||||||||||||
RBAM_002280__    701 GAGACCTTCACAGAGAATTGACGGAAGAAGCACTGAAAGAAATGCTTGAA    750

BSNT_00344___    751 GCCGAGTTTAAGAAAAACACCAGAGACACTTCTTCTAACCGCTGGTATTG    800
                     ||.|||||||||||||||.|||||||.||||||||||||||||||||.||
RBAM_002280__    751 GCTGAGTTTAAGAAAAACGCCAGAGATACTTCTTCTAACCGCTGGTACTG    800

BSNT_00344___    801 GAGGGGCAAGAAAAATGGATAA    822
                     ||||||||||||||||||||||
RBAM_002280__    801 GAGGGGCAAGAAAAATGGATAA    822


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