Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05404 and BSU40620

See DNA alignment / Visit BSNT_05404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:15
# Commandline: needle
#    -asequence pep-align/BSNT_05404.1.22522.seq
#    -bsequence pep-align/BSU40620___yybJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05404-BSU40620___yybJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05404-BSU40620___yybJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05404
# 2: BSU40620___yybJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity:      96/229 (41.9%)
# Similarity:   142/229 (62.0%)
# Gaps:          21/229 ( 9.2%)
# Score: 461.0
# 
#
#=======================================

BSNT_05404         1 MSKSAYLKVEHLTKKIRKQVLIDDISLQLDRGKIYGFTGKNGSGKTMLFK     50
                          .::|.:|||||:|..::|:||...::|.|||..|.||||||||.:
BSU40620___yy      1 -----MIEVLNLTKKIKKTTVLDNISYTFEKGTIYGLFGSNGSGKTMLLR     45

BSNT_05404        51 AICGLIKPSSGFIEINGKKLGGKISFPESVGAIIEYPGFLPNYTGFKNLK    100
                     |:.|||.|:.|.|.|.|::|...||||:|||.|||....||.|..|.|||
BSU40620___yy     46 ALSGLIVPTEGSITIKGEQLHKDISFPKSVGLIIENMQLLPQYDAFTNLK     95

BSNT_05404       101 MIADIKGILTEDQIKNTIESVGLNPDDKRKFKDYSLGMKQRLGIAQAIME    150
                     :::.||.|.:::.|.::|..|||...:..|...:||||||||.|||||.|
BSU40620___yy     96 ILSKIKKIASDNDILDSISRVGLENFNSVKVSKFSLGMKQRLNIAQAIFE    145

BSNT_05404       151 DPELIILDEPTNALDKDGISLVKNLLIELKEKNKLILLASHESESLEFLS    200
                     .|::::|||||||:|:.|::.|.::|::.|::...|::.||..|.:..|.
BSU40620___yy    146 KPDILLLDEPTNAIDEKGVAFVHDILLQEKKRGATIIITSHHKEDIISLC    195

BSNT_05404       201 DEIFMVEKGTIINHTILKS----------    219
                     |  ..:|    :||..|::          
BSU40620___yy    196 D--IALE----MNHGRLETSEKVIYKKDS    218


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