Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00966 and BSU05590

See DNA alignment / Visit BSNT_00966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:25
# Commandline: needle
#    -asequence pep-align/BSNT_00966___ydgD.1.22522.seq
#    -bsequence pep-align/BSU05590___ydgD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00966___ydgD-BSU05590___ydgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00966___ydgD-BSU05590___ydgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00966___ydgD
# 2: BSU05590___ydgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:     107/114 (93.9%)
# Similarity:   108/114 (94.7%)
# Gaps:           5/114 ( 4.4%)
# Score: 543.0
# 
#
#=======================================

BSNT_00966___      1 -----MKVSLAVFMLAGGIIKVSRVPFQVEHWRHYQYPLWFLTVTGILEI     45
                          |||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd      1 MISIMMKVSLAVFMLAGGIIKVSRVPFQVEHWRHYQYPLWFLTVTGILEI     50

BSNT_00966___     46 AGALAMTAGIWNRYAAIGAGVLFVVLMAGAIHAHMFRARQSVIMAIPAMI     95
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU05590___yd     51 AGALAMTAGIWNRYAAIGAGVLFVVLMAGAIHAHMFRARQSVIMAIQAMI    100

BSNT_00966___     96 CLIVSIMIILGSYT    109
                     |||||||||:||||
BSU05590___yd    101 CLIVSIMIIMGSYT    114


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