Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00966 and BSU05590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:25
# Commandline: needle
# -asequence dna-align/BSNT_00966___ydgD.1.22522.seq
# -bsequence dna-align/BSU05590___ydgD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00966___ydgD-BSU05590___ydgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00966___ydgD-BSU05590___ydgD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00966___ydgD
# 2: BSU05590___ydgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 325/345 (94.2%)
# Similarity: 325/345 (94.2%)
# Gaps: 15/345 ( 4.3%)
# Score: 1605.0
#
#
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BSNT_00966___ 1 ---------------ATGAAAGTCAGTTTGGCAGTTTTTATGCTTGCGGG 35
|||||||||||||||||||||||||||||||||||
BSU05590___yd 1 ATGATATCTATTATGATGAAAGTCAGTTTGGCAGTTTTTATGCTTGCGGG 50
BSNT_00966___ 36 AGGCATCATAAAGGTAAGCCGCGTTCCCTTTCAAGTTGAGCATTGGCGGC 85
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd 51 AGGCATCATAAAGGTAAGCCGCGTTCCCTTTCAAGTTGAGCATTGGCGGC 100
BSNT_00966___ 86 ATTATCAATATCCATTATGGTTTCTGACTGTTACTGGCATTCTTGAAATA 135
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd 101 ATTATCAATATCCATTATGGTTTCTGACTGTTACTGGCATTCTTGAAATA 150
BSNT_00966___ 136 GCCGGGGCACTTGCTATGACAGCGGGAATTTGGAATCGGTATGCAGCAAT 185
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd 151 GCCGGGGCACTTGCTATGACAGCGGGAATTTGGAATCGGTATGCAGCAAT 200
BSNT_00966___ 186 TGGAGCAGGTGTTCTGTTTGTCGTTCTCATGGCGGGAGCCATTCATGCGC 235
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU05590___yd 201 TGGAGCAGGTGTTCTGTTTGTCGTTCTCATGGCGGGAGCAATTCATGCGC 250
BSNT_00966___ 236 ATATGTTTCGAGCAAGACAATCGGTCATCATGGCGATACCAGCGATGATT 285
||||||||||||||||||||||.||||||||||||||||.||||||||||
BSU05590___yd 251 ATATGTTTCGAGCAAGACAATCTGTCATCATGGCGATACAAGCGATGATT 300
BSNT_00966___ 286 TGTTTGATTGTTTCTATCATGATCATCCTGGGGAGTTACACGTAA 330
||||||||||||||.||||||||||||.|||||||||||||||||
BSU05590___yd 301 TGTTTGATTGTTTCAATCATGATCATCATGGGGAGTTACACGTAA 345
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