Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06292 and BPUM_3736

See DNA alignment / Visit BSNT_06292 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_06292___rnpA.1.24716.seq
#    -bsequence pep-align/BPUM_3736___rnpA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06292___rnpA-BPUM_3736___rnpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06292___rnpA-BPUM_3736___rnpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06292___rnpA
# 2: BPUM_3736___rnpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:      97/121 (80.2%)
# Similarity:   106/121 (87.6%)
# Gaps:           7/121 ( 5.8%)
# Score: 472.5
# 
#
#=======================================

BSNT_06292___      1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDELRVGLSVSKK     50
                     |||||||||||:||||||.|.|:||||||:|.||||..||||:|||||||
BPUM_3736___r      1 MKKRNRLKKNEEFQKVFKKGQSMANRQFVIYQLDQPNQDELRLGLSVSKK     50

BSNT_06292___     51 IGNAVMRNRIKRLIRQAFLEEKERLK-EKDYIIIARKPASQLTFEETKKS     99
                     ||||||||||||||||.||||..:|| |||||:|||||||:|||||||||
BPUM_3736___r     51 IGNAVMRNRIKRLIRQVFLEEGHKLKQEKDYIVIARKPASELTFEETKKS    100

BSNT_06292___    100 LQHLFRKSSLY----KKSSSK    116
                     ||||||||::|    ||||  
BPUM_3736___r    101 LQHLFRKSAVYQQQPKKSS--    119


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