Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06280 and BPUM_3727

See DNA alignment / Visit BSNT_06280 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_06280___spo0J.1.24716.seq
#    -bsequence pep-align/BPUM_3727___spo0J.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06280___spo0J-BPUM_3727___spo0J.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06280___spo0J-BPUM_3727___spo0J.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06280___spo0J
# 2: BPUM_3727___spo0J
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     230/286 (80.4%)
# Similarity:   260/286 (90.9%)
# Gaps:           4/286 ( 1.4%)
# Score: 1178.0
# 
#
#=======================================

BSNT_06280___      1 --MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALA     48
                       ||||||||||||||.||.:|||||||||.|||||||||||.||::||:
BPUM_3727___s      1 MRMAKGLGKGINALFNTVDSNEETVEEIKIKDLRPNPYQPRKTFDEDALS     50

BSNT_06280___     49 ELKESVLQHGILQPLIVRKSLKGYDIVAGERRFRAAKLAGLDTVPAIVRE     98
                     :||||:.|||:|||:|||||:|||||||||||||||:.|||.|:||||||
BPUM_3727___s     51 DLKESIQQHGVLQPIIVRKSIKGYDIVAGERRFRAAQQAGLTTIPAIVRE    100

BSNT_06280___     99 LSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKS    148
                     .||.||||||||||||||||||||||:||.|||.||.:|||:||||||||
BPUM_3727___s    101 FSETLMREIALLENLQREDLSPLEEAEAYASLLDHLSVTQEELAKRLGKS    150

BSNT_06280___    149 RPHIANHLRLLTLPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKV    198
                     ||||||||||||||:.:|:|||:||||||||||||.|||||||.|||:|:
BPUM_3727___s    151 RPHIANHLRLLTLPDEVQKLIADGTLSMGHGRTLLSLKNKNKLAPLVKKI    200

BSNT_06280___    199 IAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESYLQNYFGTT    248
                     :.|.|||||:|:|:||||:||||||||||..||.|||||||:|||||||:
BPUM_3727___s    201 VDEGLNVRQVEKLVQQLNENVPRETKKKEAPKDRVLKERESFLQNYFGTS    250

BSNT_06280___    249 VNIKRQKKKGKIEIEFFSNEDLDRILELLSERES--    282
                     |:||:|||||||||||.|||||:|||||||.|||  
BPUM_3727___s    251 VSIKKQKKKGKIEIEFLSNEDLERILELLSTRESSE    286


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