Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06280 and BPUM_3727
See
Amino acid alignment /
Visit
BSNT_06280 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_06280___spo0J.1.24716.seq
# -bsequence dna-align/BPUM_3727___spo0J.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06280___spo0J-BPUM_3727___spo0J.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06280___spo0J-BPUM_3727___spo0J.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06280___spo0J
# 2: BPUM_3727___spo0J
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 890
# Identity: 633/890 (71.1%)
# Similarity: 633/890 (71.1%)
# Gaps: 70/890 ( 7.9%)
# Score: 2141.0
#
#
#=======================================
BSNT_06280___ 1 ------ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCA 44
|||||||||||.||||||||.||.||||||||..||||||| ||
BPUM_3727___s 1 ATGCGAATGGCTAAAGGTCTTGGAAAGGGTATTAATGCACTATTTAA-CA 49
BSNT_06280___ 45 -GGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAAAATTGCCGATTTA 93
.|||||||....||||||.||.|||||||||||.|||||....|||||.
BPUM_3727___s 50 CTGTAGATTCAAATGAAGAAACGGTTGAAGAAATCAAAATAAAGGATTTG 99
BSNT_06280___ 94 CGCCCTAATCCTTATCAGCCAA-GAAAACACTTTGATGACGAGGCATTAG 142
||.||.||.||.|||||||||| |||||| .||||||||.||.|||||..
BPUM_3727___s 100 CGTCCGAACCCATATCAGCCAAGGAAAAC-GTTTGATGAAGATGCATTGT 148
BSNT_06280___ 143 CTGAACTAAAAGAATCTGTGCTGCAGCATGGCATTCTTCAGCCGCTTATC 192
||||.||.|||||||||.|.|.|||||||||..|..|.||||||.|.||.
BPUM_3727___s 149 CTGATCTGAAAGAATCTATTCAGCAGCATGGTGTGTTACAGCCGATCATT 198
BSNT_06280___ 193 GTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGTTT 242
|||.|.|||||..|.|||||.|||||.|||||.||.||||||||.|||||
BPUM_3727___s 199 GTCCGCAAATCGATTAAAGGATATGACATTGTAGCAGGTGAACGTCGTTT 248
BSNT_06280___ 243 TCGAGCGGC----AAAGCTGG-----CAGGTTTAGATACAGTTCCGGCCA 283
.||.||.|| .||||||| || ||..||||.||.|
BPUM_3727___s 249 CCGTGCAGCTCAACAAGCTGGTCTGACA---------ACGATTCCTGCGA 289
BSNT_06280___ 284 TTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAATTGCTTTATTAGAA 333
|.|||||.|||||.|||||..||.|.|||||.||||||||..|.||||||
BPUM_3727___s 290 TCGTCCGAGAATTTTCAGAAACGCTGATGAGAGAAATTGCCCTTTTAGAA 339
BSNT_06280___ 334 AATCTT-CAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATG 382
|| ||| ||.||.||.|||||||||||..|.|||||.||..|.||.||||
BPUM_3727___s 340 AA-CTTGCAACGAGAGGATTTATCTCCATTAGAAGAAGCGGAAGCCTATG 388
BSNT_06280___ 383 ACTCCTTGTTGAAACACTTAGATCTCACACAAGAGCAGCTTGCCAAACGT 432
..||||||.|..|.|||.||..|.|.||.|||||..|..|.||.||.||.
BPUM_3727___s 389 CTTCCTTGCTAGATCACCTAAGTGTGACGCAAGAAGAATTAGCGAAGCGA 438
BSNT_06280___ 433 CTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACACT 482
.|.|||||.||||||||||||||||||||||||.|..|.||..||||..|
BPUM_3727___s 439 TTAGGGAAGAGCAGACCGCATATTGCGAATCATCTCCGCCTTTTGACTTT 488
BSNT_06280___ 483 GCCAGA--AAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGG 530
.||.|| ||.|| ||..||||.|||||.||.||||||.|.||.|||||
BPUM_3727___s 489 ACCGGATGAAGTA--CAAAAGCTGATTGCAGATGGTACGTTATCGATGGG 536
BSNT_06280___ 531 ACATGGACGCACGCTT-CTTGGCTTAAAAAACAAAAATAAGCTTGAACCG 579
|||||||.|.|| ||| |||.||||.|||||||||||||||||.|..||.
BPUM_3727___s 537 ACATGGAAGAAC-CTTGCTTAGCTTGAAAAACAAAAATAAGCTGGCGCCA 585
BSNT_06280___ 580 CTGGTACAAAAAGTGATTGCGGAGCAG---CTCAATGTTCGCCAGCTTGA 626
.|||||.|.||| ||.|.|||..|| .|.||.||.||.|||.||||
BPUM_3727___s 586 TTGGTAAAGAAA---ATCGTGGACGAGGGATTAAACGTACGTCAGGTTGA 632
BSNT_06280___ 627 GCAGCTGATTCAGCAGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAA 676
|.|.||..||||||||||.||..|.|||||||||||||||||||||||||
BPUM_3727___s 633 GAAACTTGTTCAGCAGTTAAACGAAAATGTTCCACGTGAAACAAAGAAAA 682
BSNT_06280___ 677 AAGA---ACCTGTGAAA-GATGCG-GTTCTAAAAGAGCGAGAATCCTATC 721
|||| ||| ||| ||| || ||..|.|||||..||||.| ||.||
BPUM_3727___s 683 AAGAAGCACC----AAAGGAT-CGAGTGTTGAAAGAAAGAGAGT-CTTTC 726
BSNT_06280___ 722 -TCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAA 770
|.|||||.||.|||||.||..||||....||.||.|.||||||||||||
BPUM_3727___s 727 TTACAAAACTACTTTGGCACTTCAGTGTCGATCAAGAAACAGAAGAAAAA 776
BSNT_06280___ 771 AGGCAAAATCGAAATTGAATTTTTCTCTAATGAAGACCTTGACCGGATTT 820
|||.|||||.||.|||||||||.||||.||.|||||..|.||..|.||..
BPUM_3727___s 777 AGGAAAAATAGAGATTGAATTTCTCTCCAACGAAGATTTAGAAAGAATCC 826
BSNT_06280___ 821 TAGA---GCTTTTGTCTGAAC--GAGAATCATAA------ 849
|.|| |||| ||| || |||||||||.|
BPUM_3727___s 827 TCGAATTGCTT---TCT--ACGAGAGAATCATCAGAGTGA 861
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.