Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01410 and BPUM_3666

See DNA alignment / Visit BSNT_01410 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence pep-align/BSNT_01410___yfhB.1.24716.seq
#    -bsequence pep-align/BPUM_3666.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01410___yfhB-BPUM_3666.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01410___yfhB-BPUM_3666.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01410___yfhB
# 2: BPUM_3666
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     100/302 (33.1%)
# Similarity:   158/302 (52.3%)
# Gaps:          13/302 ( 4.3%)
# Score: 392.5
# 
#
#=======================================

BSNT_01410___      1 MKEAEVLKYEAFTSSPGKGNPAGVVLQGDDYTEDEMQIIAERAGYSETSF     50
                     |::..|...:|||:....||.|||||.||..||||||.||:.....|:.|
BPUM_3666          1 MRDIRVYHVDAFTTEKFGGNAAGVVLDGDLLTEDEMQNIAKELNLPESVF     50

BSNT_01410___     51 I--RKSESADLELRYFTPGHEMNLCGHATVASLYALC-EKGMLESGKTYS     97
                     :  ...:.||..::||||..|:|.||||||...:.|. |.|:.:......
BPUM_3666         51 LLPAHDKEADYRVKYFTPTEEVNFCGHATVGLTWLLATELGLAKEKTGVV    100

BSNT_01410___     98 IQTKAGILPVKISEKDGR-IHITLEQASPQFKPFTGDRKKLADALGITDE    146
                     ::||.|.:||...|::|: |.:.:.|.:|:.:.|..|.::|:|.:|::.:
BPUM_3666        101 LETKIGHVPVVWHEENGKVIDVEMTQVTPKTRDFMIDLEELSDMIGVSSD    150

BSNT_01410___    147 DFHEDLPIVFGSTGIWTAIVPLKSLEASKKMVPDNKQFPEVLVDLPKASV    196
                     ......||...:||.|..:||:|..:...:..|:.....::..:....:.
BPUM_3666        151 RIDPSYPIKLANTGNWHLLVPMKHQQDIDQAAPNLAALGKMNKEQNITTT    200

BSNT_01410___    197 HPFTFETVHPDSDLHGRHFSSPYSGTIEDPVTGTASGVMGAYMKHYG---    243
                     |.:||.|. .:.||:.|.| :|..|..||||||.|:|.:..|:...|   
BPUM_3666        201 HLYTFHTA-KEVDLYTRDF-APGIGIPEDPVTGAANGALAGYLYIEGIIS    248

BSNT_01410___    244 NAEQHKFIIEQGQEIGKDG--KVEIEMNEAGGHVKVNMTGTAVYSETRIL    291
                     ..|..:..|.||..||:.|  ::.:..||:...:||  .|.||.:...:|
BPUM_3666        249 QQETTRLNIAQGDAIGRPGILRITVIPNESKPVIKV--AGAAVITIRGVL    296

BSNT_01410___    292 KF    293
                     ..
BPUM_3666        297 TI    298


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