Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05898 and BPUM_3500
See
DNA alignment /
Visit
BSNT_05898 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence pep-align/BSNT_05898___ywaA.1.24716.seq
# -bsequence pep-align/BPUM_3500___ywaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05898___ywaA-BPUM_3500___ywaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05898___ywaA-BPUM_3500___ywaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05898___ywaA
# 2: BPUM_3500___ywaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 288/363 (79.3%)
# Similarity: 324/363 (89.3%)
# Gaps: 0/363 ( 0.0%)
# Score: 1528.0
#
#
#=======================================
BSNT_05898___ 1 MTKQTIRVELTSTKKPKPDPNQLSFGRVFTDHMFVMDYAADKGWYDPRII 50
|.||.|||||:|||||||..:||.||::||||||||||:.|:||||||||
BPUM_3500___y 1 MPKQPIRVELSSTKKPKPQSDQLEFGKIFTDHMFVMDYSIDQGWYDPRII 50
BSNT_05898___ 51 PYQPLSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSN 100
|||.:.||||:|||||||:||||||||||||..:|||||||||||||:||
BPUM_3500___y 51 PYQAIPMDPASMVYHYGQSVFEGLKAYVSEDQKILLFRPEKNMERLNRSN 100
BSNT_05898___ 101 DRLCIPQIDEEQVLEGLKQLVAIDKDWIPNAEGTSLYIRPFIIATEPFLG 150
|||||||||.|.|||||.:|:.|||||:|:|||||||||||||:|||:||
BPUM_3500___y 101 DRLCIPQIDTETVLEGLNELIRIDKDWVPDAEGTSLYIRPFIISTEPYLG 150
BSNT_05898___ 151 VAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAG 200
||.|.|||||||||||||||||||.|||||||:|||||||||||||||||
BPUM_3500___y 151 VAPSSTYKLLIILSPVGSYYKEGIHPVKIAVENEFVRAVKGGTGNAKTAG 200
BSNT_05898___ 201 NYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTP 250
|||||||||||||.|||||||||||:||||||||||||||||||||||||
BPUM_3500___y 201 NYASSLKAQQVAETKGFSQVLWLDGVEKKYIEEVGSMNIFFKINGEIVTP 250
BSNT_05898___ 251 MLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFG 300
.||||||||||||||:.||||||:.|:||||:|||:|:||:.|.|||.||
BPUM_3500___y 251 ELNGSILEGITRNSVLELLKHWGIPVTERKISIDELIEAHQSGELEEIFG 300
BSNT_05898___ 301 TGTAAVISPVGELIWQDETLSINNGETGEIAKKLYDTITGIQKGAVADEF 350
||||||||||||||:.|:...|.:|:|||::||||:.|||||||...|.|
BPUM_3500___y 301 TGTAAVISPVGELIYHDQPYVIQDGQTGEVSKKLYEAITGIQKGTQPDIF 350
BSNT_05898___ 351 GWTTEVAALTESK 363
|||.||.::.:..
BPUM_3500___y 351 GWTVEVDSVVKQA 363
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.