Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05857 and BPUM_3484

See DNA alignment / Visit BSNT_05857 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_05857___thiM.1.24716.seq
#    -bsequence pep-align/BPUM_3484___thiM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05857___thiM-BPUM_3484___thiM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05857___thiM-BPUM_3484___thiM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05857___thiM
# 2: BPUM_3484___thiM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     155/273 (56.8%)
# Similarity:   195/273 (71.4%)
# Gaps:          22/273 ( 8.1%)
# Score: 776.0
# 
#
#=======================================

BSNT_05857___      1 -------------------MHSITNNVVTNFTANGLLALGASPVMAYAKE     31
                                        :|:|||.||||||||||||||||||||.|||
BPUM_3484___t      1 MKTSIASHLLEKVRAENPLVHNITNQVVTNFTANGLLALGASPVMANAKE     50

BSNT_05857___     32 EVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGA     81
                     |||:||::|.|||||||||:||:||:||:||:|||:.|:||:|||||.||
BPUM_3484___t     51 EVAEMAQLADALVLNIGTLTKETVESMILAGQSANKKGIPVLLDPVGVGA    100

BSNT_05857___     82 TPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDI    131
                     |.||.::|:.::.:|.:..:|||||||||.:.|..|..|||||....||:
BPUM_3484___t    101 TTFRLKAAKQLLEQVNITVVRGNAAEIAHLLEVDGWESKGVDAKAANGDV    150

BSNT_05857___    132 IRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLL    181
                     ..|.:|||:.|.||:.|||||||::|...|.::||||:.||||||.||||
BPUM_3484___t    151 SALVKQAAKTLQTVVVITGEVDVVSDGEDVLSIHNGHEWLTKVTGTGCLL    200

BSNT_05857___    182 TSVVGAFCAVEENPLFAAIVAISSYGVAAQLAAKQTADQGPGSFQIELLN    231
                     |||:|||||..|.||.|:..|:..|||||:.||:.|.::|||:||:||||
BPUM_3484___t    201 TSVIGAFCAAGERPLHASAAALLFYGVAAEKAAQYTQNKGPGTFQMELLN    250

BSNT_05857___    232 KLSTVTEQDVQEWATIER-VTVS    253
                     .||..|..||.....|.| ||  
BPUM_3484___t    251 ALSHTTGNDVLTLGKIGRNVT--    271


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