Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05825 and BPUM_3455

See DNA alignment / Visit BSNT_05825 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_05825___vpr.1.24716.seq
#    -bsequence pep-align/BPUM_3455___vpr.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05825___vpr-BPUM_3455___vpr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05825___vpr-BPUM_3455___vpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05825___vpr
# 2: BPUM_3455___vpr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 808
# Identity:     521/808 (64.5%)
# Similarity:   640/808 (79.2%)
# Gaps:           2/808 ( 0.2%)
# Score: 2744.0
# 
#
#=======================================

BSNT_05825___      1 MKKGIIRFLLVSFVLFFALSTGITGVQAAPASSKTSADLEKAEVFGDIDM     50
                     |||.|.|..::.|...|.|||..||.|||.|.|....:|||||:||:|::
BPUM_3455___v      1 MKKVISRSSVLLFSTIFVLSTFFTGQQAAAAPSNKQVELEKAEIFGEINV     50

BSNT_05825___     51 TTSKKTTVIVELKEKSLAEAKEAGESQSKSKLKTARTKAKNKAIKAVKNG    100
                     .:.|.||||||||||||.|||:.|::|:|:.||.:|||.||:|:|.:...
BPUM_3455___v     51 KSRKHTTVIVELKEKSLVEAKQEGKAQTKASLKKSRTKVKNEALKEIDKA    100

BSNT_05825___    101 KVNREYEQVFSGFSMKLPANEIPKLLAVKDVKAVYPNVTYKTDNMKDKDV    150
                     .|.:|||:||||||||||||||||||||..||||||:|||:||.:|.:.:
BPUM_3455___v    101 SVRQEYEKVFSGFSMKLPANEIPKLLAVDGVKAVYPDVTYQTDEVKKESI    150

BSNT_05825___    151 TISEDAVSPQMDDSAPYIGANDAWDLGYTGKGIKVAIIDTGVEYNHPDLK    200
                     .:..:.|||.||.|||:|||..|||.||:|||:|||:|||||:|.|||||
BPUM_3455___v    151 QLPNEDVSPLMDKSAPFIGAPKAWDAGYSGKGVKVAVIDTGVDYTHPDLK    200

BSNT_05825___    201 KNFGQYKGYDFVDNDYDPKETPTGDPRGGATDHGTHVAGTVAANGTIKGV    250
                     .|||.|||||||||||.|:|||.|||||.:||||||||||:||||.:|||
BPUM_3455___v    201 GNFGLYKGYDFVDNDYSPQETPKGDPRGESTDHGTHVAGTIAANGQMKGV    250

BSNT_05825___    251 APDATLLAYRVLGPGGSGTSENVIAGVERAVQDGADVMNLSLGNSLNNPD    300
                     |.|||||||||||||||||:|||:||::|||.|||||||||||||:||||
BPUM_3455___v    251 AKDATLLAYRVLGPGGSGTTENVLAGIDRAVTDGADVMNLSLGNSVNNPD    300

BSNT_05825___    301 WATSTALDWAMSEGVVAVTSNGNSGPNGWTVGSPGTSREAISVGATQLPL    350
                     :|||.||||||||||||||||||||||.||||||||||:||||||||||.
BPUM_3455___v    301 YATSIALDWAMSEGVVAVTSNGNSGPNSWTVGSPGTSRDAISVGATQLPY    350

BSNT_05825___    351 NEYAVTFGSYSSAKVMGYNKEDDVKALNNKEVELVEAGIGEAKDFEGKDL    400
                     :.|.|||.:||:||||||.:|.|:|||:.|:|.||.||||:.|.||..|:
BPUM_3455___v    351 SLYNVTFPNYSTAKVMGYYQESDLKALDQKQVTLVHAGIGDEKAFEDIDV    400

BSNT_05825___    401 TGKVAVVKRGSIAFVDKADNAKKAGAIGMVVYNNLSGEIEANVPGMSVPT    450
                     .|||||::||:||||||.||||.|||||:|::||..|||..:|||:::||
BPUM_3455___v    401 KGKVAVIERGAIAFVDKVDNAKAAGAIGVVMFNNTDGEIPVDVPGLALPT    450

BSNT_05825___    451 IKLSLEDGEKLVSALKAGETKTTFKLTVSKALGEQVADFSSRGPVMDTWM    500
                     ||||..:|..||:|::||...|||.:...|.|.||||||||||||:||||
BPUM_3455___v    451 IKLSKAEGTALVNAIEAGNNTTTFSIQFVKELSEQVADFSSRGPVVDTWM    500

BSNT_05825___    501 IKPDISAPGVNIVSTIPTHDPDHPYGYGSKQGTSMASPHIAGAVAVIKQA    550
                     ||||:|||||:||||||||||..||||||||||||||||:||..|:||||
BPUM_3455___v    501 IKPDLSAPGVSIVSTIPTHDPSQPYGYGSKQGTSMASPHVAGVAAIIKQA    550

BSNT_05825___    551 KPKWSVEQIKTAIMNTAVTLKDSDGEVYPHNAQGAGSARIMNAIKADSLV    600
                     ||.:|..|||..:||||..|.|::|..:|||.||.||.||:.:::|.|:|
BPUM_3455___v    551 KPSYSTAQIKALLMNTAEKLFDANGNPFPHNTQGTGSVRIIESLQASSIV    600

BSNT_05825___    601 SPGSYSYGTFLKENGNETKNETFTIENQSSIRKSYTLEYSFNGSGISTSG    650
                     |..||||||||||.|.:.|.:.|.:||.|...|:||::|.|:||||||:|
BPUM_3455___v    601 SDASYSYGTFLKEKGVQIKTKKFKVENLSKAPKTYTIDYKFDGSGISTNG    650

BSNT_05825___    651 TSRVVIPAHQTGKATAKVKVNTKKTKAGTYEGTVIVREGGKTVAKVPTLL    700
                     |.::.:..:.||..|:.|:|...|||.|||:|::.:||.|:.|.::||||
BPUM_3455___v    651 TKKITVKGNSTGSFTSAVQVKYGKTKKGTYQGSITLRENGRKVTEIPTLL    700

BSNT_05825___    701 IVKEPDYPRVTSVSVSEGSVQGTYQIETYLPAGAEELAFLVYDSNLDFAG    750
                     |||||||||||||||...:..|:|.|.:|||.|||.||||||.::.::.|
BPUM_3455___v    701 IVKEPDYPRVTSVSVEPDNRAGSYVISSYLPGGAENLAFLVYSTDGEYLG    750

BSNT_05825___    751 QAGIYKNQDKGYQYFDWDGTINGGTKLPAGEYYLLAYAANKGKSSQVLTE    800
                     :||:|::.|||.....|:||||.|.||.:|||.:||||:.||||..|.|:
BPUM_3455___v    751 EAGVYQHVDKGEHRVKWNGTINQGQKLESGEYTMLAYASLKGKSDTVQTK    800

BSNT_05825___    801 EPFTVE--    806
                     |||.:.  
BPUM_3455___v    801 EPFDIYPE    808


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05825 and BPUM_3455

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
