Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06032 and BPUM_3408

See DNA alignment / Visit BSNT_06032 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence pep-align/BSNT_06032___yxiC.1.24716.seq
#    -bsequence pep-align/BPUM_3408.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06032___yxiC-BPUM_3408.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06032___yxiC-BPUM_3408.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06032___yxiC
# 2: BPUM_3408
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      35/92 (38.0%)
# Similarity:    57/92 (62.0%)
# Gaps:           3/92 ( 3.3%)
# Score: 165.0
# 
#
#=======================================

BSNT_06032___      1 MAQEIKMVYGTVKQGLSQLKNS-AELKSSLPGHLSGRNHLNVVKSIEQLN     49
                     |::|||:....||:.|...|.| |::.::.|..:.|||.|....::|::|
BPUM_3408          1 MSREIKIDASQVKRVLQHAKQSGAQMNATHPTTIKGRNQLLTADTLEKIN     50

BSNT_06032___     50 EDIKELTEAYASVLAKHIAQTESAVNAMKETDENISSSMK--     89
                     :.:.||:.:|..:|.|.:.|||.|||.|.|||:.::||.|  
BPUM_3408         51 QQLNELSTSYIGILQKQLVQTEQAVNTMIETDKALASSSKRK     92


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