Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05461 and BPUM_3250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_05461___gerBC.1.24716.seq
# -bsequence pep-align/BPUM_3250___gerBC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05461___gerBC-BPUM_3250___gerBC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05461___gerBC-BPUM_3250___gerBC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05461___gerBC
# 2: BPUM_3250___gerBC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity: 177/382 (46.3%)
# Similarity: 251/382 (65.7%)
# Gaps: 9/382 ( 2.4%)
# Score: 950.0
#
#
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BSNT_05461___ 1 --MKTMLKLFVMVLMLQMLCGCWDVKNIEKLSFARGLALDETDDHQYKLT 48
.:.:|.:|:...:..:..||||:|:||||||.||:.:||.:....|||
BPUM_3250___g 1 MRGRRVLFIFLSCCLFLLSAGCWDLKDIEKLSFVRGVGIDEEEQKGVKLT 50
BSNT_05461___ 49 YQNLLPQSEDSQASGKPEFVNVTSHGKTILEAVSDVSIKDPPIYSDHLKV 98
||||:|:...:|.:..|.:|||.|.||.:|||||:|::|||||||||||:
BPUM_3250___g 51 YQNLVPKMGGTQEADSPGYVNVVSKGKNVLEAVSNVALKDPPIYSDHLKI 100
BSNT_05461___ 99 ILLGEKLMRNQNIDQVFNHFIRDDELRRSSYLMAARGKAGDIFTKGSPKQ 148
.|.|:....:.:|....||||||||:||||||:.:||.|..:..: ..|.
BPUM_3250___g 101 FLFGKDQAEHHDIQGTLNHFIRDDEVRRSSYLLVSRGDASKVINQ-KLKS 149
BSNT_05461___ 149 QLPMPSEKLIDLTNNSGYNGKIMMPLRIGRASIYCQNGYSFLIQAVKNQK 198
|..:|.|.:.:.:.|..:||||::|.||||||.|.|.|.|||:|:|....
BPUM_3250___g 150 QQKVPVEHIFETSKNRNFNGKILLPTRIGRASDYFQMGVSFLVQSVDAID 199
BSNT_05461___ 199 GKAKYDGAGIIKRGSNKLVGFLSADETQTLTWVMGTIQGGVMPTTDKGHP 248
|:..|||||||...:.||:||:.|.:.|:|.|||..|.|||:|.|.||.|
BPUM_3250___g 200 GELIYDGAGIIHGKNRKLIGFIPAKDVQSLNWVMDRISGGVVPATYKGFP 249
BSNT_05461___ 249 ITFEIKKSKTKIKPVIDNGKPVFQISVKTKGILTEDQNPNENSFSKRYLH 298
||:||||:||||:|.:.:|...|:|.|.|.|.|:|||.|.|||:.::|:.
BPUM_3250___g 250 ITYEIKKAKTKIEPYLKDGHISFKIIVNTNGKLSEDQYPAENSYDEQYIQ 299
BSNT_05461___ 299 RLENIFEKKLERDVKQVMDKLQHEYKTDPVFLSDHIRIQHPDYWNKVKGH 348
|.|.:|..|:::.:::.:..:|.|...||:|||...||::||||.|.:..
BPUM_3250___g 300 RFERLFANKIKQRIQKAVHHVQKEVGVDPIFLSRQFRIKYPDYWEKHRDE 349
BSNT_05461___ 349 WDEIFSEADFKYDISFKIINFGTVGK------ 374
||.:|.||:.:||:...|:|||..|.
BPUM_3250___g 350 WDALFQEAEIEYDVKVSILNFGAEGSTKSFKW 381
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