Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02177 and BPUM_3157
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_02177___ykcB.1.24716.seq
# -bsequence pep-align/BPUM_3157.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02177___ykcB-BPUM_3157.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02177___ykcB-BPUM_3157.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02177___ykcB
# 2: BPUM_3157
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 737
# Identity: 427/737 (57.9%)
# Similarity: 551/737 (74.8%)
# Gaps: 51/737 ( 6.9%)
# Score: 2197.5
#
#
#=======================================
BSNT_02177___ 1 MEKKKRELDIFLILILLASAFLNIYNIWNDDTVNPYYTAAVTSMMQSFHN 50
|.::.::.|::|..||:.||.||||||||:||||.||||||||||||:||
BPUM_3157 1 MIRRFQKFDLYLFFILILSAILNIYNIWNNDTVNAYYTAAVTSMMQSWHN 50
BSNT_02177___ 51 FFYASFDAAGFITVDKPPITFQIQTISALIFGMHGWSVILPQALAGVGSV 100
||:.|||.:|::||||||:.|.:|||||.|||:|||||||||||||:|||
BPUM_3157 51 FFFTSFDPSGYVTVDKPPLAFWLQTISAKIFGLHGWSVILPQALAGIGSV 100
BSNT_02177___ 101 LLMYLLIKPTFGKTAARIASFIMACTPIAVAVARTNNVDALLVFFLLLAT 150
.|:|.|:|||||:.|||:::.|||||||||||:||||:|:||||.|||||
BPUM_3157 101 YLIYRLVKPTFGQAAARLSALIMACTPIAVAVSRTNNIDSLLVFILLLAT 150
BSNT_02177___ 151 WLLFKAIRKGKLIWLLAAFFVVGVGFNTKMLQAYMILPAFLLFYLIAANA 200
.::|||:::.|::|.:|:|.::|:||||||||||||:||.:|||:||...
BPUM_3157 151 AMMFKAVKQQKVLWAIASFAMIGIGFNTKMLQAYMIVPALVLFYIIAFRT 200
BSNT_02177___ 201 TIKKKIVSLVSALAVLAAVSLSWPLIVDNIPASKRPYIGSSQTNSVLELA 250
|.|||::||:.::.||.:||.||.:.||......|||:||||:||.||||
BPUM_3157 201 TWKKKLLSLLISMIVLLSVSASWSIAVDLTSKDNRPYMGSSQSNSALELA 250
BSNT_02177___ 251 FGYNGIQRLTGQNSGG------GQGAP---NKDASKEMSSSDNTQAPPNQ 291
|||||:||||||.||| |:|.| ..|...:..||:.|| ||:.
BPUM_3157 251 FGYNGLQRLTGQQSGGRGGTNQGEGQPPSQQGDQQNDNESSNMTQ-PPSS 299
BSNT_02177___ 292 SSSNSSSSDGKSSN---GNMAAPP--SNG----QMPSGGQG-GPPSGGDG 331
.:.|:|.:..:|.| .:|..|| :|| .|||||.. |||:||
BPUM_3157 300 GNQNNSDNSNQSFNQQQTSMQGPPRSANGTIPPDMPSGGNSDGPPNGG-- 347
BSNT_02177___ 332 GQGGPGGDGGKGGTGTGSKMQSGSGMFGTGTPGPLRLFQQELSDQISWLL 381
|.||.||||||||||.|||||||.||||||||||
BPUM_3157 348 ----------------GGKMGSGSGMFGTGTKGPLRLFQSELSDQISWLL 381
BSNT_02177___ 382 PFAIFGIAGLLIAGARERRRLSIEQKETVFWVAWLVPIAGFFSVAEFFHH 431
|||:||..|:..:...|||||:.:||||:||:|||:|:|.|||:|.||||
BPUM_3157 382 PFALFGAIGIFFSTVFERRRLNTKQKETLFWLAWLIPVAAFFSIAGFFHH 431
BSNT_02177___ 432 YYLIMLAPPIAALVGAGWVALVHLYRNQTGWKAWLLPGAIIATTGFELFI 481
|||||||||||.|.|||||::..|::..||:|.||||.||..||.||:.|
BPUM_3157 432 YYLIMLAPPIAVLAGAGWVSMTQLFQTGTGFKKWLLPIAIFVTTAFEILI 481
BSNT_02177___ 482 LRNYNDQIGAGWSIGVGVIGVLSAIALLLFKQRQKPFSYYVSLAALLALL 531
|..:...||.|.|:.||:||:.:.::|||.|.::| ...:|||.|:|.::
BPUM_3157 482 LSTFTSTIGLGLSVAVGIIGIGTILSLLLIKGKEK-LKQFVSLIAILGMM 530
BSNT_02177___ 532 VMPIYWASTPLLYGGNSSLPETGPQLASMSGKGMGMSDATVNEKLIKYLE 581
:.|:|||||||||||||.|||||||||:.|| .|| :.||||||.|||
BPUM_3157 531 IAPLYWASTPLLYGGNSMLPETGPQLATSSG---SMS-SQVNEKLINYLE 576
BSNT_02177___ 582 ENNSGAEYLFATTDSNTAAPYIIKTKKAVMAIGGYSGSDPAITLTQFKKL 631
:||:|.|:||.|||:.||:||||||.|||||:||:||||..:||::||:.
BPUM_3157 577 KNNTGEEFLFGTTDATTASPYIIKTGKAVMALGGFSGSDNILTLSEFKQF 626
BSNT_02177___ 632 VKEGKVKYFLASGMGRGGNNDIVEWVEKNGKEVASEKWQSSSDQKT-ENT 680
||:||:|||..||| |||::||:.|::|||||||:..||:||..|| :.|
BPUM_3157 627 VKDGKIKYFYLSGM-RGGSSDILTWIQKNGKEVATSNWQNSSTSKTNQQT 675
BSNT_02177___ 681 DSADTSSSKASGE-NGKMGGPGGMNQSATLYELHADE 716
||:|:..|:.:.: ||:||| .:|.|||:|..|
BPUM_3157 676 DSSDSQQSEQNNQSNGRMGG----MESGTLYKLSVD- 707
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