Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05344 and BPUM_3146

See DNA alignment / Visit BSNT_05344 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence pep-align/BSNT_05344___yvkN.1.24716.seq
#    -bsequence pep-align/BPUM_3146.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05344___yvkN-BPUM_3146.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05344___yvkN-BPUM_3146.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05344___yvkN
# 2: BPUM_3146
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      34/77 (44.2%)
# Similarity:    48/77 (62.3%)
# Gaps:           2/77 ( 2.6%)
# Score: 152.0
# 
#
#=======================================

BSNT_05344___      1 MEKDPSDYTVTQESVLKLIHEQKRMNREMIAELEQIHGPFPISHDIQYIK     50
                      ..|..:...|.:::|.||.:||.||.:||.|||.||...|...||:|:|
BPUM_3146          1 -MTDHHNTNQTAQTLLDLIQKQKSMNSDMIRELETIHPSHPKYGDIRYLK     49

BSNT_05344___     51 VLLDSSNTHIVQDLMSVSKQLYKKTL-     76
                     ||||||:|||::||..:|..:.|:.. 
BPUM_3146         50 VLLDSSSTHILKDLTQLSHLMPKEDAQ     76


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