Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04860 and BPUM_2936

See DNA alignment / Visit BSNT_04860 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_04860___yusF.1.24716.seq
#    -bsequence pep-align/BPUM_2936.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04860___yusF-BPUM_2936.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04860___yusF-BPUM_2936.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04860___yusF
# 2: BPUM_2936
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      70/146 (47.9%)
# Similarity:    98/146 (67.1%)
# Gaps:          29/146 (19.9%)
# Score: 368.5
# 
#
#=======================================

BSNT_04860___      1 MLAVNFTAFFYNLNVSNLPRQVNKMKIDELEKVMIVEGKSDKEKIESVLN     50
                                 :.|.|:          |:|||:|||||:||:|::.|::
BPUM_2936          1 ------------MIVMNV----------EVEKVIIVEGKTDKQKLKEVIS     28

BSNT_04860___     51 EPVRIICTNGTISQLRLEELADELYDKDVYILVDADESGEKLRKQLKREF    100
                     |||.|||||||||..:|::|.|||..||||||.|:|::|:|||||.::||
BPUM_2936         29 EPVTIICTNGTISTSKLDQLVDELLGKDVYILADSDDAGDKLRKQFRKEF     78

BSNT_04860___    101 NEACHLHIDRAYKEVAAAPRHHVASVLLRANLNVHTIFLERKSRGV    146
                     .||.||.:||.|:||||:|..|:||:||.||::||:.:|       
BPUM_2936         79 PEALHLFVDRTYREVAASPSAHIASILLAANIDVHSKYL-------    117


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