Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02166 and BPUM_2740

See DNA alignment / Visit BSNT_02166 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_02166___xhlB.1.24716.seq
#    -bsequence pep-align/BPUM_2740___xhlB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02166___xhlB-BPUM_2740___xhlB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02166___xhlB-BPUM_2740___xhlB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02166___xhlB
# 2: BPUM_2740___xhlB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      54/87 (62.1%)
# Similarity:    64/87 (73.6%)
# Gaps:           0/87 ( 0.0%)
# Score: 271.0
# 
#
#=======================================

BSNT_02166___      1 MNTFDKGTVIRTVLLLIALINQTMLMLGKSPLDIQEEQVNQLADALYSAG     50
                     |.|||||||||||||.|||||||::|.|::.|.|.||||....:|||.||
BPUM_2740___x      1 MKTFDKGTVIRTVLLFIALINQTLVMFGQTVLPISEEQVQTAGEALYVAG     50

BSNT_02166___     51 SIAFTIGTTLAAWFKNNYITEKGKKQRDLLRDNNLTK     87
                     |..||:.|.:.|||||||:|.||..|:|.|:...|||
BPUM_2740___x     51 STIFTMVTAIIAWFKNNYVTYKGHLQKDTLKQRGLTK     87


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