Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03809 and BPUM_2291

See DNA alignment / Visit BSNT_03809 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence pep-align/BSNT_03809___comEC.1.24716.seq
#    -bsequence pep-align/BPUM_2291___comEC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03809___comEC-BPUM_2291___comEC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03809___comEC-BPUM_2291___comEC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03809___comEC
# 2: BPUM_2291___comEC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 784
# Identity:     343/784 (43.8%)
# Similarity:   506/784 (64.5%)
# Gaps:          26/784 ( 3.3%)
# Score: 1680.5
# 
#
#=======================================

BSNT_03809___      1 ------MAAASATAGITAAAYFPAIFLFILFLLIILI-----KTRHAFLI     39
                           ..|.||..||..|||...:: |:|||||||:     |....||:
BPUM_2291___c      1 MFNYLPFGAISAAVGIALAAYHLHMY-FLLFLLIILLLSLLKKIPKLFLV     49

BSNT_03809___     40 I-VCFFSFILFFVLYAV--TDSQNVSSYRQGTYQFKAVIDTIPKIDGDRM     86
                     : :|...:.|.|:::..  ||......:..|:    .||:||||.||:|.
BPUM_2291___c     50 VSLCGAVYTLIFMVHEFFETDQPVQEKFFSGS----VVIETIPKTDGNRF     95

BSNT_03809___     87 SMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATV    136
                     |..|.|.| |:.||.|.||:..|||.|..:||||||.:||.:..|.|||:
BPUM_2291___c     96 SATVSTSD-ERLAAFYTIQTEREKEALKDVEPGMSCHMTGEVRPPKHATI    144

BSNT_03809___    137 PGAFDYNEYLYRQHIHWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNS    186
                     ...|.|:::|..:.||..:...||::|::.:...|.:..:|:..:.|...
BPUM_2291___c    145 SNGFHYDQFLKSKGIHAIFLPQSIKDCTKNDRPSYYLQKMRQKGLRFLED    194

BSNT_03809___    187 LLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHVGILTA    236
                     .:|.:|.||||||..|||..::.:.|..||.||::||||||||||..|.|
BPUM_2291___c    195 HVPKNSVGIVQALIFGDRDLIDPDTLRDYQMLGIIHLLAISGLHVQTLLA    244

BSNT_03809___    237 GLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAG    286
                     .||:.::|.|:|||.|.:|||.|||:|..|||||||||||.||:|:||..
BPUM_2291___c    245 CLFWCLLRAGVTRETARLLLLCFLPVYACLTGAAPSVLRACLMAGIYLVM    294

BSNT_03809___    287 SLVKWRVHSATAICLS--YIVLLLFNPYHLFEAGFQLSFAVSFSLILSSS    334
                     :.:...:...:|:.||  ::.||..:|.:||:.||||||.|:..::||:.
BPUM_2291___c    295 TSLPKEMKQPSAVVLSATFLFLLAIHPLYLFDIGFQLSFVVTLFILLSTR    344

BSNT_03809___    335 IFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYT    384
                     |..|.|:::.||.::|.||||.|||:|||||.|||::|:|:||:.|||||
BPUM_2291___c    345 ILSQAKSAVMQLFLISFIAQLASLPVLLYHFQQFSLLSIPLNMIFVPFYT    394

BSNT_03809___    385 FCILPGAVAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNIADVEVFTI    434
                     ..:||.::...||..:.:..|::.|...|.:|..:::|..::|..:.|.:
BPUM_2291___c    395 TVVLPLSLLFFLLSIIYLPLGQMLFQLLDSVIQLSHQLSAHMAVFDGFNL    444

BSNT_03809___    435 MIAHPAPVLLFLFTVTIILLLMAIE-KRSLSQLMVTGGICCTVMFLLFIY    483
                     :........:.|...||:.||..:| ..|:...:|...:...|:.:.:..
BPUM_2291___c    445 IFMKSTWWHILLEVSTIVFLLFMVECNSSMKSYIVPILLLIGVLSVHYFT    494

BSNT_03809___    484 PCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQ    533
                     |....:|||.|:|:|||||:|:..|:::|.:|:||||.||:..|||::::
BPUM_2291___c    495 PNFLQKGEVTMLDVGQGDSLFIQLPYRKGHLLVDTGGRLSFDDEPWKKRR    544

BSNT_03809___    534 HPFSLGEKVLIPFLTAKGIKQLDALILTHADQDHIGEAETLLKHHKVKRL    583
                     ...::|::.|||||.:|||.:||.||||||||||:|||..|:|..|||||
BPUM_2291___c    545 KVSTIGDQTLIPFLHSKGIAKLDVLILTHADQDHMGEAIRLIKRKKVKRL    594

BSNT_03809___    584 VIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPGAP    633
                     .|||||...|:|||:|:.|.|:|:.|:|::|||.||:.:..|.||.|...
BPUM_2291___c    595 AIPKGFARNPEDEKLLKEAAEKGIVIDELERGDQLQVGEHIFEVLHPSQD    644

BSNT_03809___    634 DPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVG    683
                     ...||||.||||....||..::.|||||.|||:::::.:|:::|||||||
BPUM_2291___c    645 MVTSKNNDSLVLSFTLGGKRFLFTGDLEHEGERDIIEAYPHLRADVLKVG    694

BSNT_03809___    684 HHGSKGSTGEEFIQQLQPKTAIISAGKNNRYHHPHQEVLQLLQRHSIRVL    733
                     ||||||||.:|::|.|:|..|:||||:.|||.||||:||:.|:.|..:|.
BPUM_2291___c    695 HHGSKGSTSDEWLQHLKPSIALISAGERNRYQHPHQDVLKKLKDHQTKVY    744

BSNT_03809___    734 RTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN    767
                     |||::|::.:.:..:.|||..:|||   ||.:..
BPUM_2291___c    745 RTDRDGSVTFEFIEQKGTFYTHPPY---DILQNQ    775


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03809 and BPUM_2291

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
