Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03723 and BPUM_2221

See DNA alignment / Visit BSNT_03723 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03723___yqzD.1.24716.seq
#    -bsequence pep-align/BPUM_2221___yqzD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03723___yqzD-BPUM_2221___yqzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03723___yqzD-BPUM_2221___yqzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03723___yqzD
# 2: BPUM_2221___yqzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      91/117 (77.8%)
# Similarity:   104/117 (88.9%)
# Gaps:           2/117 ( 1.7%)
# Score: 436.5
# 
#
#=======================================

BSNT_03723___      1 MEIAIIALFIVSIALIAFSYSQRDPMKDVEQELETLQLSAMQEIYKLKKK     50
                     ||||||.|.:|||.||||||.||:|:|:||||||||||||||||||||||
BPUM_2221___y      1 MEIAIIGLLVVSIVLIAFSYFQREPIKEVEQELETLQLSAMQEIYKLKKK     50

BSNT_03723___     51 MTVLEEELLETNLVIRKSKQSDINQKIAKQILSKYNNGMSAEAIAKAEHV    100
                     |.||||||||||:|:|  |.|:|:..||:||:||:.||||.||||:||||
BPUM_2221___y     51 MKVLEEELLETNIVVR--KHSEIDPSIARQIISKHQNGMSPEAIARAEHV     98

BSNT_03723___    101 SVEDVNTIIKDNEKVLV    117
                     ||||||.||||||:|||
BPUM_2221___y     99 SVEDVNMIIKDNERVLV    115


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.