Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03660 and BPUM_2185

See DNA alignment / Visit BSNT_03660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_03660___yqhM.1.24716.seq
#    -bsequence pep-align/BPUM_2185.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03660___yqhM-BPUM_2185.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03660___yqhM-BPUM_2185.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03660___yqhM
# 2: BPUM_2185
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     239/278 (86.0%)
# Similarity:   260/278 (93.5%)
# Gaps:           0/278 ( 0.0%)
# Score: 1284.0
# 
#
#=======================================

BSNT_03660___      1 MQKETWRFIDSGNASPAFNMALDEALLYWHSEKKIPPVIRFYGWNPATLS     50
                     ||||.|.|||:||..||||||:|||||||||||.||||||||||||||||
BPUM_2185          1 MQKEKWCFIDTGNQDPAFNMAMDEALLYWHSEKLIPPVIRFYGWNPATLS     50

BSNT_03660___     51 VGYFQNIKKEINFEAVHKYNLGFVRRPTGGRGVLHDQELTYSVIVSEEHP    100
                     |||||:::||||.|||.:|.||||||||||||||||||||||||||||||
BPUM_2185         51 VGYFQHVEKEINMEAVERYGLGFVRRPTGGRGVLHDQELTYSVIVSEEHP    100

BSNT_03660___    101 EMPATVTEAYRVISEGILQGFRNLGLDAYFAIPRTEKEKESLKNPRSSVC    150
                     ||||||||||||||||||:||:.||||||||||||:||||||||||||||
BPUM_2185        101 EMPATVTEAYRVISEGILEGFKELGLDAYFAIPRTDKEKESLKNPRSSVC    150

BSNT_03660___    151 FDAPSWYELVVEGRKVAGSAQTRQKGVILQHGSILLDLDEDKLFDLFLYP    200
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
BPUM_2185        151 FDAPSWYELVVEGRKVAGSAQTRQKGVILQHGSILIDLDEDKLFDLFLYP    200

BSNT_03660___    201 SERVRERMQRNFKNKAVAINELTEKRVTMDEARKAFKEGFETGLNIHLEP    250
                     ::||||||||:||||||||||::::..|:|:||.|||.|||.||||.|.|
BPUM_2185        201 NDRVRERMQRSFKNKAVAINEISDRTCTIDDARVAFKRGFEKGLNIELVP    250

BSNT_03660___    251 YELSQEELGFVHHLAETKYASDEWNYKR    278
                     |||:.|||.||||||:||||||||||||
BPUM_2185        251 YELTDEELAFVHHLAKTKYASDEWNYKR    278


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