Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03541 and BPUM_2112
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence pep-align/BSNT_03541___namA.1.24716.seq
# -bsequence pep-align/BPUM_2112___yqjM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03541___namA-BPUM_2112___yqjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03541___namA-BPUM_2112___yqjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03541___namA
# 2: BPUM_2112___yqjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 248/338 (73.4%)
# Similarity: 291/338 (86.1%)
# Gaps: 0/338 ( 0.0%)
# Score: 1329.0
#
#
#=======================================
BSNT_03541___ 1 MARKLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAI 50
|..|||:|.|:|.:||||||||||||||||:::||||.|||..||||||.
BPUM_2112___y 1 METKLFSPWTLKGVTLKNRIVMSPMCMYSSYDRDGKLQPFHFTHYISRAQ 50
BSNT_03541___ 51 GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIG 100
||.|||:||||||:|:|||:||||||||||||||||.|.||:|..|:|..
BPUM_2112___y 51 GQAGLIMVEASAVSPEGRISDQDLGIWSDEHIEGFASLNEQIKAYGTKTA 100
BSNT_03541___ 101 IQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAA 150
||||||||||||:|||.|||:|.|||||.|||:||.:::|:|||.|:.||
BPUM_2112___y 101 IQLAHAGRKAELDGDILAPSSIPFDEQSKTPVQMSVDQIKDTVQAFQDAA 150
BSNT_03541___ 151 ARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREI 200
.|||:||||:||||.||||||:||||||:|||||:||||||||||||||:
BPUM_2112___y 151 VRAKKAGFDIIEIHGAHGYLINEFLSPLANHRTDDYGGSPENRYRFLREV 200
BSNT_03541___ 201 IDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250
::.|.:||||||||||||||||.|||||||:||.|.|:|||||||||.||
BPUM_2112___y 201 VNAVNEVWDGPLFVRVSASDYTTKGLDIADYIGIATWLKEQGVDLIDVSS 250
BSNT_03541___ 251 GALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGR 300
||:|.|.|:.||||||:|||||:|.|.:.|||||:||.|..|||||:|.|
BPUM_2112___y 251 GAVVQARISTFPGYQVTFAEKIKEGAGIQTGAVGLITSGVQAEEILRNQR 300
BSNT_03541___ 301 ADLIFIGRELLRDPFFARTAAKQLNTEIPAPVQYERGW 338
|||||||||.||||:|.:|||::|.|.|..|.||:|.|
BPUM_2112___y 301 ADLIFIGREFLRDPYFPKTAAEELRTSIEGPRQYDRAW 338
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