Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03481 and BPUM_2070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence pep-align/BSNT_03481.1.24716.seq
# -bsequence pep-align/BPUM_2070___spoVAEA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03481-BPUM_2070___spoVAEA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03481-BPUM_2070___spoVAEA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03481
# 2: BPUM_2070___spoVAEA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 146/205 (71.2%)
# Similarity: 166/205 (81.0%)
# Gaps: 5/205 ( 2.4%)
# Score: 753.0
#
#
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BSNT_03481 1 MTTKRKVILVTDGDVYAAKTIEYAASKVGGRCISQSKGNPSTRSGAELVK 50
|..:||||||||||:|||||||.||..|||||||.||||||.|:|.|||:
BPUM_2070___s 1 MGQRRKVILVTDGDIYAAKTIELAAKNVGGRCISSSKGNPSKRTGPELVQ 50
BSNT_03481 51 LIASAPYDPVFVMFDDSGLQGEGPGEAALTYVATHPSIEVLGVIAVASKT 100
:|...|.||||||||||||.|||.||.|:.:||.||.|||:|.|||||||
BPUM_2070___s 51 MILKTPNDPVFVMFDDSGLTGEGTGEMAMKHVAHHPEIEVIGAIAVASKT 100
BSNT_03481 101 HQAEWTRVDVSIDRNGEITEYGVDKVGEREFDDHRMSGDTVYCLDKLDLP 150
||||||:|.|:|||.||:|||||||.|..|.:.|:||||||||||.||||
BPUM_2070___s 101 HQAEWTKVHVAIDREGELTEYGVDKHGLPEMEPHKMSGDTVYCLDSLDLP 150
BSNT_03481 151 LIVGIGDIGKMGRKDDISKGSPITMKAVEFILERSGYHAGPQGRENSGLS 200
|:||||||||||||||:||||||||||||.||||||:| :.|::..:.
BPUM_2070___s 151 LVVGIGDIGKMGRKDDLSKGSPITMKAVELILERSGFH---EERQSKRVP 197
BSNT_03481 201 ESS-- 203
.|.
BPUM_2070___s 198 RSEEK 202
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