Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03481 and BPUM_2070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_03481.1.24716.seq
# -bsequence dna-align/BPUM_2070___spoVAEA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03481-BPUM_2070___spoVAEA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03481-BPUM_2070___spoVAEA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03481
# 2: BPUM_2070___spoVAEA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 645
# Identity: 431/645 (66.8%)
# Similarity: 431/645 (66.8%)
# Gaps: 69/645 (10.7%)
# Score: 1371.5
#
#
#=======================================
BSNT_03481 1 ATGACGACAAA-ACGCAAGGTCATACTGGTAACAGACGGGGATGTTTATG 49
||| .|.|||| |||.||.|||||..|.||.||||||||.|||.|.||||
BPUM_2070___s 1 ATG-GGGCAAAGACGGAAAGTCATTTTAGTGACAGACGGAGATATATATG 49
BSNT_03481 50 CCGCTAAAACAATTGAATACGCCGCAAGCAAAGTGGGAGGCCGATGCATT 99
|.||.|||||.|||||....||.||.|..||.||.||.||.|||||.|||
BPUM_2070___s 50 CTGCCAAAACCATTGAGCTTGCGGCTAAAAATGTCGGTGGGCGATGTATT 99
BSNT_03481 100 TCACA-ATCAAAAGGGAATCCTTCCACCCGCAGCGGCGCCGAGCTTGT-C 147
|| || .||||||||.|||||...||..||.|..||..|.||.||||| |
BPUM_2070___s 100 TC-CAGCTCAAAAGGAAATCCAAGCAAACGAACAGGACCTGAACTTGTGC 148
BSNT_03481 148 AAGCTGAT--------CGCCTCAGCACCGTATGATCCTGTATTTGTCATG 189
|| .|||| || |||.|||||||.||.|||||||||
BPUM_2070___s 149 AA-ATGATTTTAAAAACG--------CCGAATGATCCAGTGTTTGTCATG 189
BSNT_03481 190 TTTGACGACTCCGGCCTTCAAGGAGAGGGTCC--GGGAGAAGCCGCTCTA 237
|||||.||.||.|||||...|||.||.||..| ||||||.|.||.|..|
BPUM_2070___s 190 TTTGATGATTCTGGCCTGACAGGTGAAGGAACAGGGGAGATGGCGATGAA 239
BSNT_03481 238 ACCTATGTCGCA--ACCCATCCGTCT---ATTGAAGTGCTCGGTGTGATT 282
.|.|.||.|||| ||| || ||||||||..||||.|.|||.
BPUM_2070___s 240 GCATGTGGCGCATCACC-------CTGAAATTGAAGTCATCGGGGCGATC 282
BSNT_03481 283 GCGGTCGCGTCAAAAACACATCAGGCTGAATGGACCAGGGTCGATGTAAG 332
||.||.||.||.|||||.|||||.|||||||||||.|.|||..||||...
BPUM_2070___s 283 GCCGTTGCCTCCAAAACGCATCAAGCTGAATGGACAAAGGTTCATGTTGC 332
BSNT_03481 333 CATTGACCGCAATGGAGAAATAACTGAATACGGCGTCGATAAAGTCGGGG 382
|||||||||..|.||.|||.|.||.||||||||||||||.|| |
BPUM_2070___s 333 CATTGACCGTGAGGGTGAACTGACAGAATACGGCGTCGACAA-------G 375
BSNT_03481 383 AAAGG-------GAATTTGATGACCACAGAATGAGTGGAGATACAGTCTA 425
.|.|| |||.|.||...|||.|.||||||.||||||||.||.||
BPUM_2070___s 376 CATGGCCTTCCCGAAATGGAGCCCCATAAAATGAGCGGAGATACCGTGTA 425
BSNT_03481 426 TTGCCTTGATAAACTTGATCTCCCACTTATTGTCGGTATCGGGGATATCG 475
|||.|||||....||.|||||.||.|||.||||.||.||.||||||||.|
BPUM_2070___s 426 TTGTCTTGACTCGCTCGATCTTCCGCTTGTTGTTGGAATTGGGGATATTG 475
BSNT_03481 476 GCAAAATGGGCAGAAAAGACGATATCTCA--AAAGGGTCGCCAATCACCA 523
||||||||||..|.|||||.| ||||.| |||||.||.||.|||||.|
BPUM_2070___s 476 GCAAAATGGGACGGAAAGATG--ATCTGAGCAAAGGATCTCCGATCACAA 523
BSNT_03481 524 TGAAAGCGGTCGAGTTTATTTTAGAAAGGAGCGGGTATCATGCCGGACCA 573
|||||||.||.||.||.||||||||||||||.||.|..||||
BPUM_2070___s 524 TGAAAGCAGTTGAATTAATTTTAGAAAGGAGTGGTTTCCATG-------- 565
BSNT_03481 574 CAAGGAAGAGAAAATTCGGGTTTATCGGAATCC--AGCTAA---- 612
|||.||||.|||.|....||.||.||..|||| ||..||
BPUM_2070___s 566 -AAGAAAGACAAAGTAAACGTGTACCGAGATCCGAAGAAAAATGA 609
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